Variant report

Variant	rs878478
Chromosome Location	chr10:44182337-44182338
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:44173522..44175308-chr10:44181432..44183348,2	K562	blood:

Extended variants
information (count: 29 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10450466	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11238621	0.98[ASN][1000 genomes]
rs17154089	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17154099	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17154103	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17154107	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17154117	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17154128	0.87[ASN][1000 genomes]
rs17154131	1.00[CHB][hapmap];0.85[JPT][hapmap];0.88[ASN][1000 genomes]
rs17154135	1.00[CHB][hapmap];0.85[JPT][hapmap];0.87[ASN][1000 genomes]
rs3128252	0.82[ASN][1000 genomes]
rs3814562	1.00[CEU][hapmap];0.85[CHB][hapmap];0.92[JPT][hapmap];1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4491169	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4614394	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs57182212	1.00[AFR][1000 genomes];0.81[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs57408979	1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs57969344	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs58593574	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs58757312	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs60643875	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs60933829	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs61697162	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs73260785	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73262706	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73264454	0.83[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73264491	1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs73266505	1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7893286	1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7907742	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44174400-44184600	Weak transcription	Lung	lung
2	chr10:44174400-44185000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr10:44177400-44184600	Weak transcription	Fetal Brain Male	brain
4	chr10:44179600-44184800	Weak transcription	NHDF-Ad	bronchial
5	chr10:44179600-44185000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr10:44179600-44185000	Weak transcription	Osteobl	bone
7	chr10:44181600-44184000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
8	chr10:44181600-44184600	Weak transcription	Fetal Heart	heart
9	chr10:44181600-44184600	Weak transcription	Skeletal Muscle Male	skeletal muscle
10	chr10:44181600-44185000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
11	chr10:44182000-44184600	Weak transcription	Pancreas	Pancrea
12	chr10:44182000-44184800	Weak transcription	Adipose Nuclei	Adipose
13	chr10:44182000-44184800	Weak transcription	Left Ventricle	heart
14	chr10:44182000-44184800	Weak transcription	Right Atrium	heart
15	chr10:44182000-44184800	Weak transcription	Skeletal Muscle Female	skeletal muscle
16	chr10:44182200-44184800	Weak transcription	Right Ventricle	heart

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