The 2.0 version of rSNPBase

Variant report

Variant rs62273896
Chromosome Location chr3:156539021-156539022
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:156535400-156539200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
2 chr3:156535400-156543400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr3:156536200-156543200 Weak transcription Fetal Kidney kidney
4 chr3:156536400-156542400 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr3:156536400-156542400 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr3:156536400-156543000 Weak transcription Skeletal Muscle Female skeletal muscle
7 chr3:156536400-156543200 Weak transcription Breast Myoepithelial Primary Cells Breast
8 chr3:156536400-156543200 Weak transcription Primary T helper naive cells fromperipheralblood blood
9 chr3:156536400-156543200 Weak transcription Primary T killer naive cells fromperipheralblood blood
10 chr3:156536400-156543200 Weak transcription Thymus Thymus
11 chr3:156536600-156541600 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr3:156536800-156541800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr3:156537000-156540400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
14 chr3:156537000-156540400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr3:156537000-156541800 Weak transcription Fetal Intestine Small intestine
16 chr3:156537000-156543200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr3:156537000-156543400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
18 chr3:156537000-156543400 Weak transcription Liver Liver
19 chr3:156537000-156543600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr3:156537000-156543600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
21 chr3:156537200-156541000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr3:156537200-156542600 Weak transcription Duodenum Mucosa Duodenum
23 chr3:156537600-156542400 Weak transcription K562 blood
24 chr3:156538000-156543400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr3:156538600-156539200 Enhancers GM12878-XiMat blood
26 chr3:156538600-156540800 Weak transcription Primary hematopoietic stem cells short term culture blood
27 chr3:156538600-156543200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
28 chr3:156538600-156543400 Weak transcription NHLF lung
29 chr3:156538800-156540400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr3:156538800-156542000 Weak transcription NHEK skin
31 chr3:156538800-156542200 Weak transcription A549 lung
32 chr3:156538800-156543200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr3:156538800-156543200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr3:156538800-156543200 Weak transcription NHDF-Ad bronchial
35 chr3:156538800-156543400 Weak transcription HSMMtube muscle
36 chr3:156539000-156542000 Weak transcription Stomach Mucosa stomach
37 chr3:156539000-156542400 Weak transcription Hela-S3 cervix
38 chr3:156539000-156543200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr3:156539000-156543200 Weak transcription Muscle Satellite Cultured Cells --
40 chr3:156539000-156543200 Weak transcription HMEC breast
41 chr3:156539000-156543200 Weak transcription HSMM muscle
42 chr3:156539000-156543200 Weak transcription HUVEC blood vessel
43 chr3:156539000-156543200 Weak transcription Osteobl bone
44 chr3:156539000-156543400 Weak transcription NH-A brain

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Last update: Aug 31, 2015