The 2.0 version of rSNPBase

Variant report

Variant rs71629186
Chromosome Location chr5:43665342-43665343
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:43621800-43667400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
2 chr5:43639200-43665400 Strong transcription Primary monocytes fromperipheralblood blood
3 chr5:43640000-43665400 Strong transcription Monocytes-CD14+_RO01746 blood
4 chr5:43642800-43665800 Weak transcription H1 Cell Line embryonic stem cell
5 chr5:43643400-43665800 Strong transcription Primary hematopoietic stem cells short term culture blood
6 chr5:43644800-43666400 Strong transcription Primary B cells from peripheral blood blood
7 chr5:43650200-43685400 Weak transcription Brain Cingulate Gyrus brain
8 chr5:43650400-43665800 Weak transcription Colonic Mucosa Colon
9 chr5:43650600-43673000 Weak transcription Right Ventricle heart
10 chr5:43650800-43673200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr5:43650800-43676200 Weak transcription Brain Anterior Caudate brain
12 chr5:43651000-43665800 Weak transcription Placenta Placenta
13 chr5:43651800-43666400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
14 chr5:43652200-43666000 Weak transcription iPS-20b Cell Line embryonic stem cell
15 chr5:43652400-43665600 Weak transcription HUES6 Cell Line embryonic stem cell
16 chr5:43653000-43675600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
17 chr5:43653400-43665800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr5:43653400-43674200 Weak transcription HSMMtube muscle
19 chr5:43657000-43668400 Weak transcription Placenta Amnion Placenta Amnion
20 chr5:43657000-43674400 Weak transcription Pancreas Pancrea
21 chr5:43657600-43676200 Weak transcription Primary T killer memory cells from peripheral blood blood
22 chr5:43657600-43695200 Weak transcription K562 blood
23 chr5:43658600-43665800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
24 chr5:43659400-43696800 Weak transcription Gastric stomach
25 chr5:43659600-43675400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
26 chr5:43659600-43678200 Weak transcription Brain Hippocampus Middle brain
27 chr5:43659600-43680400 Weak transcription Psoas Muscle Psoas
28 chr5:43659600-43706200 Weak transcription Small Intestine intestine
29 chr5:43659600-43710000 Weak transcription Ovary ovary
30 chr5:43659800-43665800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr5:43659800-43665800 Weak transcription Fetal Intestine Small intestine
32 chr5:43660000-43665800 Weak transcription Brain Germinal Matrix brain
33 chr5:43660000-43685600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
34 chr5:43660200-43684800 Weak transcription HUES48 Cell Line embryonic stem cell
35 chr5:43660800-43666400 Weak transcription HUES64 Cell Line embryonic stem cell
36 chr5:43661000-43665800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr5:43661000-43665800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr5:43661000-43665800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
39 chr5:43661000-43665800 Weak transcription Fetal Adrenal Gland Adrenal Gland
40 chr5:43661000-43665800 Weak transcription Fetal Intestine Large intestine
41 chr5:43661000-43665800 Weak transcription Fetal Stomach stomach
42 chr5:43661000-43665800 Weak transcription Lung lung
43 chr5:43661000-43665800 Weak transcription Sigmoid Colon Sigmoid Colon
44 chr5:43661000-43665800 Weak transcription Thymus Thymus
45 chr5:43661000-43665800 Weak transcription Spleen Spleen
46 chr5:43661000-43666000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr5:43661000-43666000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr5:43661000-43666000 Weak transcription Aorta Aorta
49 chr5:43661000-43666200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr5:43661000-43666200 Weak transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015