Variant report

Variant rs41271083
Chromosome Location chr5:43653243-43653244
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:43604400-43660600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr5:43605000-43656000 Weak transcription Small Intestine intestine
3 chr5:43621800-43667400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
4 chr5:43630200-43658800 Weak transcription Stomach Mucosa stomach
5 chr5:43631600-43664200 Weak transcription A549 lung
6 chr5:43636400-43664200 Weak transcription Pancreatic Islets Pancreatic Islet
7 chr5:43638200-43659200 Weak transcription Colon Smooth Muscle Colon
8 chr5:43639200-43665400 Strong transcription Primary monocytes fromperipheralblood blood
9 chr5:43640000-43665400 Strong transcription Monocytes-CD14+_RO01746 blood
10 chr5:43642800-43661200 Strong transcription Primary T regulatory cells fromperipheralblood blood
11 chr5:43642800-43665800 Weak transcription H1 Cell Line embryonic stem cell
12 chr5:43643200-43661000 Strong transcription Duodenum Mucosa Duodenum
13 chr5:43643200-43661400 Strong transcription Primary T cells fromperipheralblood blood
14 chr5:43643200-43661600 Strong transcription Primary T helper cells PMA-I stimulated --
15 chr5:43643400-43665800 Strong transcription Primary hematopoietic stem cells short term culture blood
16 chr5:43643600-43665200 Strong transcription Primary T helper cells fromperipheralblood blood
17 chr5:43643800-43664600 Strong transcription Dnd41 blood
18 chr5:43644200-43660600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr5:43644200-43664000 Strong transcription Primary T helper naive cells fromperipheralblood blood
20 chr5:43644600-43657400 Strong transcription Duodenum Smooth Muscle Duodenum
21 chr5:43644600-43660000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr5:43644600-43661000 Strong transcription Rectal Mucosa Donor 29 rectum
23 chr5:43644600-43661400 Strong transcription Fetal Muscle Trunk muscle
24 chr5:43644800-43660600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
25 chr5:43644800-43666400 Strong transcription Primary B cells from peripheral blood blood
26 chr5:43645400-43660600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr5:43645400-43661000 Strong transcription Breast Myoepithelial Primary Cells Breast
28 chr5:43645400-43661000 Strong transcription Primary neutrophils fromperipheralblood blood
29 chr5:43645400-43661400 Strong transcription Fetal Thymus thymus
30 chr5:43646000-43657400 Strong transcription GM12878-XiMat blood
31 chr5:43646000-43661000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
32 chr5:43646200-43657200 Strong transcription Primary T cells from cord blood blood
33 chr5:43646400-43661400 Weak transcription H9 Cell Line embryonic stem cell
34 chr5:43646600-43657400 Strong transcription Fetal Intestine Large intestine
35 chr5:43646800-43655000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr5:43647000-43653400 Strong transcription Primary B cells from cord blood blood
37 chr5:43647000-43662400 Strong transcription Hela-S3 cervix
38 chr5:43647000-43664200 Weak transcription iPS-18 Cell Line embryonic stem cell
39 chr5:43647800-43657600 Strong transcription Rectal Mucosa Donor 31 rectum
40 chr5:43647800-43661400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr5:43648000-43653400 Strong transcription Primary hematopoietic stem cells blood
42 chr5:43648000-43653600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
43 chr5:43648000-43657000 Strong transcription Fetal Muscle Leg muscle
44 chr5:43648000-43657200 Strong transcription Thymus Thymus
45 chr5:43648000-43660200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
46 chr5:43648200-43653600 Strong transcription Brain Hippocampus Middle brain
47 chr5:43648200-43657400 Strong transcription Primary T helper 17 cells PMA-I stimulated --
48 chr5:43648200-43657400 Strong transcription Sigmoid Colon Sigmoid Colon
49 chr5:43648600-43654000 Strong transcription Fetal Stomach stomach
50 chr5:43648800-43653400 Strong transcription Primary T helper naive cells from peripheral blood blood

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