The 2.0 version of rSNPBase

Variant report

Variant rs34753533
Chromosome Location chr5:43633984-43633985
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:43604400-43635000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr5:43604400-43649200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr5:43604400-43649200 Weak transcription Esophagus oesophagus
4 chr5:43604400-43660600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr5:43604600-43649800 Weak transcription Colonic Mucosa Colon
6 chr5:43604800-43635400 Weak transcription Gastric stomach
7 chr5:43604800-43635400 Weak transcription Spleen Spleen
8 chr5:43604800-43649800 Weak transcription iPS-20b Cell Line embryonic stem cell
9 chr5:43605000-43656000 Weak transcription Small Intestine intestine
10 chr5:43606800-43648200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
11 chr5:43608400-43640600 Strong transcription Dnd41 blood
12 chr5:43610800-43649400 Weak transcription Primary T killer naive cells fromperipheralblood blood
13 chr5:43612600-43649400 Weak transcription Primary T killer memory cells from peripheral blood blood
14 chr5:43612800-43647400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
15 chr5:43613200-43635400 Weak transcription Aorta Aorta
16 chr5:43613400-43645400 Weak transcription Primary T helper naive cells from peripheral blood blood
17 chr5:43613800-43635400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr5:43613800-43646200 Weak transcription HUES6 Cell Line embryonic stem cell
19 chr5:43614000-43635600 Weak transcription Placenta Amnion Placenta Amnion
20 chr5:43614000-43647600 Weak transcription HUES64 Cell Line embryonic stem cell
21 chr5:43616000-43648200 Weak transcription HepG2 liver
22 chr5:43617000-43635600 Weak transcription Fetal Kidney kidney
23 chr5:43619000-43642800 Weak transcription Fetal Brain Male brain
24 chr5:43620000-43634800 Weak transcription Fetal Brain Female brain
25 chr5:43620200-43635400 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr5:43620200-43650600 Weak transcription Placenta Placenta
27 chr5:43621200-43650200 Weak transcription NHEK skin
28 chr5:43621600-43651800 Weak transcription HMEC breast
29 chr5:43621800-43667400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
30 chr5:43622200-43648200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
31 chr5:43622400-43635000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
32 chr5:43622400-43635400 Weak transcription HSMMtube muscle
33 chr5:43623400-43645400 Weak transcription Breast Myoepithelial Primary Cells Breast
34 chr5:43623600-43635400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
35 chr5:43623800-43635200 Weak transcription Brain Cingulate Gyrus brain
36 chr5:43624200-43649200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr5:43624600-43634800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr5:43626400-43635800 Strong transcription Rectal Mucosa Donor 31 rectum
39 chr5:43627400-43636200 Weak transcription Pancreatic Islets Pancreatic Islet
40 chr5:43627400-43636400 Strong transcription Primary T regulatory cells fromperipheralblood blood
41 chr5:43628200-43636600 Strong transcription Primary T cells fromperipheralblood blood
42 chr5:43628200-43638400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr5:43629000-43644400 Weak transcription Fetal Intestine Small intestine
44 chr5:43629200-43635200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr5:43629400-43635000 Weak transcription Fetal Adrenal Gland Adrenal Gland
46 chr5:43629600-43634600 Weak transcription Primary neutrophils fromperipheralblood blood
47 chr5:43630000-43638200 Strong transcription Primary hematopoietic stem cells short term culture blood
48 chr5:43630200-43634800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr5:43630200-43648800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr5:43630200-43658800 Weak transcription Stomach Mucosa stomach

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Last update: Aug 31, 2015