The 2.0 version of rSNPBase

Variant report

Variant rs35393262
Chromosome Location chr5:43580063-43580064
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:43557800-43584600 Weak transcription Psoas Muscle Psoas
2 chr5:43560200-43584400 Weak transcription K562 blood
3 chr5:43564600-43580200 Weak transcription Fetal Kidney kidney
4 chr5:43565400-43601800 Weak transcription Fetal Thymus thymus
5 chr5:43565600-43581800 Weak transcription Dnd41 blood
6 chr5:43566200-43590400 Weak transcription Thymus Thymus
7 chr5:43566400-43580200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
8 chr5:43566800-43586000 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr5:43567400-43602000 Weak transcription Brain Inferior Temporal Lobe brain
10 chr5:43568000-43601800 Weak transcription Primary B cells from peripheral blood blood
11 chr5:43568000-43602400 Weak transcription Pancreas Pancrea
12 chr5:43568400-43581800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr5:43568600-43601800 Weak transcription Fetal Brain Female brain
14 chr5:43569000-43601400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
15 chr5:43569200-43591800 Weak transcription Monocytes-CD14+_RO01746 blood
16 chr5:43570000-43582000 Weak transcription Liver Liver
17 chr5:43570200-43581600 Weak transcription Left Ventricle heart
18 chr5:43570200-43601800 Weak transcription Right Ventricle heart
19 chr5:43572000-43591800 Weak transcription Aorta Aorta
20 chr5:43572000-43602400 Weak transcription Ovary ovary
21 chr5:43572400-43582600 Weak transcription Primary hematopoietic stem cells blood
22 chr5:43572600-43583400 Weak transcription Stomach Smooth Muscle stomach
23 chr5:43572800-43582000 Weak transcription Colon Smooth Muscle Colon
24 chr5:43572800-43584400 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr5:43573000-43582200 Weak transcription HSMMtube muscle
26 chr5:43573000-43582400 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr5:43573000-43582600 Weak transcription Adipose Nuclei Adipose
28 chr5:43573000-43601800 Weak transcription Breast Myoepithelial Primary Cells Breast
29 chr5:43573000-43601800 Weak transcription Primary T cells fromperipheralblood blood
30 chr5:43573400-43581600 Weak transcription Fetal Muscle Trunk muscle
31 chr5:43573600-43583200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr5:43573800-43584600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
33 chr5:43574000-43580600 Weak transcription Lung lung
34 chr5:43574000-43581800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr5:43574000-43583800 Weak transcription Brain Angular Gyrus brain
36 chr5:43574000-43601800 Weak transcription Brain Anterior Caudate brain
37 chr5:43574200-43582000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr5:43574400-43582600 Weak transcription Fetal Lung lung
39 chr5:43574400-43600800 Weak transcription Primary T helper cells fromperipheralblood blood
40 chr5:43575000-43584800 Weak transcription Brain Hippocampus Middle brain
41 chr5:43575000-43589200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
42 chr5:43575000-43592400 Weak transcription Brain Germinal Matrix brain
43 chr5:43575000-43601400 Weak transcription Primary T helper naive cells fromperipheralblood blood
44 chr5:43575800-43590800 Weak transcription Primary T regulatory cells fromperipheralblood blood
45 chr5:43575800-43592800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr5:43576000-43582600 Weak transcription Skeletal Muscle Female skeletal muscle
47 chr5:43576200-43581000 Weak transcription Fetal Muscle Leg muscle
48 chr5:43576400-43601400 Weak transcription Cortex derived primary cultured neurospheres brain
49 chr5:43576800-43583000 Weak transcription Primary T cells from cord blood blood
50 chr5:43576800-43591600 Weak transcription GM12878-XiMat blood

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Last update: Aug 31, 2015