Variant report

Variant	rs13177107
Chromosome Location	chr5:43605345-43605346
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:8)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr5:43554854..43559895-chr5:43599481..43606699,15	MCF-7	breast:
2	chr5:43604308..43606276-chr5:43607859..43609785,3	MCF-7	breast:
3	chr5:43555487..43559521-chr5:43598404..43605405,16	K562	blood:
4	chr5:43552832..43560830-chr5:43598877..43605844,26	MCF-7	breast:
5	chr5:43481246..43484731-chr5:43603166..43606245,4	K562	blood:
6	chr5:43482483..43486113-chr5:43601084..43606081,7	K562	blood:
7	chr5:43585747..43587255-chr5:43604652..43606274,2	K562	blood:
8	chr5:43601763..43605743-chr5:43610640..43615837,7	K562	blood:

No data

Variant related genes	Relation type
ENSG00000249492	Chromatin interaction
ENSG00000112992	Chromatin interaction
ENSG00000172239	Chromatin interaction
ENSG00000151881	Chromatin interaction

Extended variants
information (count: 197 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:194)

rs_ID	r²[population]
rs10058080	1.00[CEU][hapmap];0.84[CHB][hapmap];1.00[JPT][hapmap]
rs10074229	0.94[ASN][1000 genomes]
rs10461740	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10461741	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10461742	1.00[CEU][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10461743	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10461744	1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs10461747	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10462052	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10462053	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10462054	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10462055	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10462056	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10462057	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10941642	1.00[CHB][hapmap];0.82[JPT][hapmap]
rs12654258	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12655350	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12656650	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12657635	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12657724	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12658205	0.83[ASN][1000 genomes]
rs12659627	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs13155888	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs13158796	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13160431	1.00[JPT][hapmap]
rs13161149	1.00[CEU][hapmap];0.91[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs13161298	1.00[CEU][hapmap];0.84[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13161838	0.94[ASN][1000 genomes]
rs13165869	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs13166593	1.00[CEU][hapmap];0.84[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs13168053	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs13169851	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs13170672	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs13173498	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs13173517	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs13173726	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs13174983	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs13175037	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs13175688	1.00[CEU][hapmap];0.84[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13178040	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs13179099	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs13181483	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs13183122	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs13183124	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs13184712	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs13186372	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13187073	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13187313	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13188640	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13188683	1.00[CEU][hapmap];0.84[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13189630	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs13356232	0.84[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs1469436	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs16873319	1.00[JPT][hapmap]
rs16873404	1.00[CEU][hapmap];0.92[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs16873421	1.00[CEU][hapmap];0.84[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs16873432	0.87[ASN][1000 genomes]
rs16873433	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs16873435	0.87[ASN][1000 genomes]
rs16873438	0.82[JPT][hapmap];0.87[ASN][1000 genomes]
rs16873443	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs16873454	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs16873455	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs16873466	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs16873471	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16873502	1.00[CEU][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2042950	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2303732	1.00[AMR][1000 genomes]
rs34003086	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs34028586	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs34076603	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs34079397	1.00[AMR][1000 genomes];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs34153332	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs34225966	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs34289650	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs34307136	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs34308364	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs34330393	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs34350522	0.83[ASN][1000 genomes]
rs34361701	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs34369923	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs34420640	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs34435369	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs34571724	1.00[AMR][1000 genomes]
rs34572440	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs34577568	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs34753533	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs34760245	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs34784550	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs34814715	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs34844158	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs34897533	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs34902970	1.00[AMR][1000 genomes]
rs34985223	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs35023717	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs35047682	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs35069805	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs35141665	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs35201656	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35249562	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs35370110	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs35393262	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs35429460	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs35442919	1.00[AMR][1000 genomes]
rs35493041	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs35590922	0.83[ASN][1000 genomes]
rs35606071	1.00[AMR][1000 genomes]
rs35609488	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs35663171	1.00[AMR][1000 genomes]
rs35679811	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs35733458	0.83[ASN][1000 genomes]
rs35738789	1.00[AMR][1000 genomes]
rs35768478	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs35773835	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs35826690	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35890297	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs35910245	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs35979310	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36021958	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs3756417	1.00[JPT][hapmap]
rs3764979	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3764980	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3792915	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3792916	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3792917	1.00[CEU][hapmap];0.92[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3792918	0.96[ASN][1000 genomes]
rs3792921	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3792922	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3805720	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3805721	1.00[CEU][hapmap];0.84[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3805722	1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs3805723	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3828695	1.00[CEU][hapmap];0.84[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs41271083	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4264950	1.00[JPT][hapmap]
rs4382179	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4438885	1.00[JPT][hapmap]
rs4476731	1.00[AMR][1000 genomes]
rs4498257	1.00[JPT][hapmap]
rs4533897	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs62367605	1.00[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs62367607	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62367633	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs62367649	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs62367650	0.87[ASN][1000 genomes]
rs62367651	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs62367653	1.00[AMR][1000 genomes];0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs62367658	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs62368561	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs62368564	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs62368565	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs62368567	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs62368568	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs62368569	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs62368570	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs62368571	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs62368574	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs62368575	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs62368577	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs62368581	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs62368584	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs62368591	1.00[AFR][1000 genomes]
rs62368597	1.00[AFR][1000 genomes]
rs62368636	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs62368637	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs62368641	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs62368656	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs62369476	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs62369480	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs62369481	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6451719	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs6451720	0.88[ASN][1000 genomes]
rs6862487	1.00[CEU][hapmap];1.00[JPT][hapmap];0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6868763	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6889653	1.00[JPT][hapmap]
rs6890108	1.00[JPT][hapmap]
rs6893250	0.87[ASN][1000 genomes]
rs6896932	0.90[ASN][1000 genomes]
rs6898436	0.87[ASN][1000 genomes]
rs71590644	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs71590645	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs71629182	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs71629184	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs71629185	0.87[ASN][1000 genomes]
rs71629186	0.88[ASN][1000 genomes]
rs71629187	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs71629189	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs71629193	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs716960	1.00[CEU][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7713458	0.90[ASN][1000 genomes]
rs7713749	0.90[ASN][1000 genomes]
rs7716562	1.00[CEU][hapmap];0.84[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7720858	1.00[JPT][hapmap]
rs7737947	0.92[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv881017	chr5:43444826-43731692	Weak transcription Flanking Active TSS Strong transcription Enhancers Transcr. at gene 5' and 3' Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	222 gene(s)	inside rSNPs	diseases
2	nsv830275	chr5:43469511-43639384	Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	220 gene(s)	inside rSNPs	diseases
3	nsv881108	chr5:43527432-43800333	Weak transcription Strong transcription Genic enhancers Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	57 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:116 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:43604200-43631200	Weak transcription	A549	lung
2	chr5:43604400-43606400	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
3	chr5:43604400-43609800	Weak transcription	Ovary	ovary
4	chr5:43604400-43613000	Weak transcription	HUES48 Cell Line	embryonic stem cell
5	chr5:43604400-43613400	Weak transcription	Placenta Amnion	Placenta Amnion
6	chr5:43604400-43619400	Weak transcription	Placenta	Placenta
7	chr5:43604400-43619600	Weak transcription	HMEC	breast
8	chr5:43604400-43631200	Weak transcription	Pancreas	Pancrea
9	chr5:43604400-43635000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
10	chr5:43604400-43649200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
11	chr5:43604400-43649200	Weak transcription	Esophagus	oesophagus
12	chr5:43604400-43660600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr5:43604600-43605400	Enhancers	Primary T cells fromperipheralblood	blood
14	chr5:43604600-43605400	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
15	chr5:43604600-43605400	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
16	chr5:43604600-43605600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
17	chr5:43604600-43605800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
18	chr5:43604600-43606200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
19	chr5:43604600-43606400	Enhancers	Primary T helper naive cells from peripheral blood	blood
20	chr5:43604600-43606600	Enhancers	HepG2	liver
21	chr5:43604600-43607200	Weak transcription	Fetal Stomach	stomach
22	chr5:43604600-43608200	Weak transcription	HUVEC	blood vessel
23	chr5:43604600-43608800	Weak transcription	Fetal Thymus	thymus
24	chr5:43604600-43609000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
25	chr5:43604600-43609200	Weak transcription	Rectal Mucosa Donor 31	rectum
26	chr5:43604600-43609400	Weak transcription	HSMMtube	muscle
27	chr5:43604600-43609400	Weak transcription	Osteobl	bone
28	chr5:43604600-43609600	Weak transcription	Fetal Kidney	kidney
29	chr5:43604600-43609600	Weak transcription	Fetal Muscle Trunk	muscle
30	chr5:43604600-43609800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
31	chr5:43604600-43609800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
32	chr5:43604600-43609800	Weak transcription	Fetal Intestine Large	intestine
33	chr5:43604600-43611200	Weak transcription	Muscle Satellite Cultured Cells	--
34	chr5:43604600-43611400	Weak transcription	Hela-S3	cervix
35	chr5:43604600-43612000	Weak transcription	Aorta	Aorta
36	chr5:43604600-43614000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
37	chr5:43604600-43624400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
38	chr5:43604600-43649800	Weak transcription	Colonic Mucosa	Colon
39	chr5:43604800-43605400	Enhancers	Primary T helper cells fromperipheralblood	blood
40	chr5:43604800-43605400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
41	chr5:43604800-43605600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
42	chr5:43604800-43605800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
43	chr5:43604800-43605800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
44	chr5:43604800-43605800	Weak transcription	Brain Angular Gyrus	brain
45	chr5:43604800-43606000	Weak transcription	NHEK	skin
46	chr5:43604800-43606200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
47	chr5:43604800-43606200	Enhancers	Primary T helper cells PMA-I stimulated	--
48	chr5:43604800-43606400	Enhancers	Fetal Brain Male	brain
49	chr5:43604800-43608200	Weak transcription	Primary neutrophils fromperipheralblood	blood
50	chr5:43604800-43608400	Weak transcription	Brain Anterior Caudate	brain

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