The 2.0 version of rSNPBase

Variant report

Variant rs6451720
Chromosome Location chr5:43659571-43659572
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:43604400-43660600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr5:43621800-43667400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
3 chr5:43631600-43664200 Weak transcription A549 lung
4 chr5:43636400-43664200 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr5:43639200-43665400 Strong transcription Primary monocytes fromperipheralblood blood
6 chr5:43640000-43665400 Strong transcription Monocytes-CD14+_RO01746 blood
7 chr5:43642800-43661200 Strong transcription Primary T regulatory cells fromperipheralblood blood
8 chr5:43642800-43665800 Weak transcription H1 Cell Line embryonic stem cell
9 chr5:43643200-43661000 Strong transcription Duodenum Mucosa Duodenum
10 chr5:43643200-43661400 Strong transcription Primary T cells fromperipheralblood blood
11 chr5:43643200-43661600 Strong transcription Primary T helper cells PMA-I stimulated --
12 chr5:43643400-43665800 Strong transcription Primary hematopoietic stem cells short term culture blood
13 chr5:43643600-43665200 Strong transcription Primary T helper cells fromperipheralblood blood
14 chr5:43643800-43664600 Strong transcription Dnd41 blood
15 chr5:43644200-43660600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr5:43644200-43664000 Strong transcription Primary T helper naive cells fromperipheralblood blood
17 chr5:43644600-43660000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr5:43644600-43661000 Strong transcription Rectal Mucosa Donor 29 rectum
19 chr5:43644600-43661400 Strong transcription Fetal Muscle Trunk muscle
20 chr5:43644800-43660600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
21 chr5:43644800-43666400 Strong transcription Primary B cells from peripheral blood blood
22 chr5:43645400-43660600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr5:43645400-43661000 Strong transcription Breast Myoepithelial Primary Cells Breast
24 chr5:43645400-43661000 Strong transcription Primary neutrophils fromperipheralblood blood
25 chr5:43645400-43661400 Strong transcription Fetal Thymus thymus
26 chr5:43646000-43661000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
27 chr5:43646400-43661400 Weak transcription H9 Cell Line embryonic stem cell
28 chr5:43647000-43662400 Strong transcription Hela-S3 cervix
29 chr5:43647000-43664200 Weak transcription iPS-18 Cell Line embryonic stem cell
30 chr5:43647800-43661400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr5:43648000-43660200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
32 chr5:43649600-43664400 Weak transcription Fetal Brain Male brain
33 chr5:43650000-43660600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
34 chr5:43650200-43661000 Strong transcription Left Ventricle heart
35 chr5:43650200-43685400 Weak transcription Brain Cingulate Gyrus brain
36 chr5:43650400-43665800 Weak transcription Colonic Mucosa Colon
37 chr5:43650600-43673000 Weak transcription Right Ventricle heart
38 chr5:43650800-43664200 Weak transcription NHEK skin
39 chr5:43650800-43673200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
40 chr5:43650800-43676200 Weak transcription Brain Anterior Caudate brain
41 chr5:43651000-43665800 Weak transcription Placenta Placenta
42 chr5:43651400-43665000 Weak transcription NH-A brain
43 chr5:43651800-43666400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
44 chr5:43652000-43664200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
45 chr5:43652200-43666000 Weak transcription iPS-20b Cell Line embryonic stem cell
46 chr5:43652400-43664600 Strong transcription Liver Liver
47 chr5:43652400-43665600 Weak transcription HUES6 Cell Line embryonic stem cell
48 chr5:43653000-43675600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
49 chr5:43653400-43661000 Strong transcription Skeletal Muscle Male skeletal muscle
50 chr5:43653400-43661000 Strong transcription Skeletal Muscle Female skeletal muscle

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Last update: Aug 31, 2015