The 2.0 version of rSNPBase

Variant report

Variant rs71629182
Chromosome Location chr5:43643104-43643105
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:43604400-43649200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr5:43604400-43649200 Weak transcription Esophagus oesophagus
3 chr5:43604400-43660600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr5:43604600-43649800 Weak transcription Colonic Mucosa Colon
5 chr5:43604800-43649800 Weak transcription iPS-20b Cell Line embryonic stem cell
6 chr5:43605000-43656000 Weak transcription Small Intestine intestine
7 chr5:43606800-43648200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
8 chr5:43610800-43649400 Weak transcription Primary T killer naive cells fromperipheralblood blood
9 chr5:43612600-43649400 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr5:43612800-43647400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
11 chr5:43613400-43645400 Weak transcription Primary T helper naive cells from peripheral blood blood
12 chr5:43613800-43646200 Weak transcription HUES6 Cell Line embryonic stem cell
13 chr5:43614000-43647600 Weak transcription HUES64 Cell Line embryonic stem cell
14 chr5:43616000-43648200 Weak transcription HepG2 liver
15 chr5:43620200-43650600 Weak transcription Placenta Placenta
16 chr5:43621200-43650200 Weak transcription NHEK skin
17 chr5:43621600-43651800 Weak transcription HMEC breast
18 chr5:43621800-43667400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
19 chr5:43622200-43648200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
20 chr5:43623400-43645400 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr5:43624200-43649200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr5:43629000-43644400 Weak transcription Fetal Intestine Small intestine
23 chr5:43630200-43648800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr5:43630200-43658800 Weak transcription Stomach Mucosa stomach
25 chr5:43631600-43649200 Weak transcription HUES48 Cell Line embryonic stem cell
26 chr5:43631600-43651400 Weak transcription iPS-15b Cell Line embryonic stem cell
27 chr5:43631600-43664200 Weak transcription A549 lung
28 chr5:43633000-43649200 Weak transcription Ovary ovary
29 chr5:43633200-43643200 Weak transcription Brain Inferior Temporal Lobe brain
30 chr5:43633200-43644600 Weak transcription NH-A brain
31 chr5:43633800-43648600 Weak transcription Fetal Stomach stomach
32 chr5:43634200-43648400 Weak transcription HUVEC blood vessel
33 chr5:43635000-43650000 Weak transcription K562 blood
34 chr5:43635200-43644800 Weak transcription Primary B cells from peripheral blood blood
35 chr5:43635200-43648000 Weak transcription Fetal Lung lung
36 chr5:43635400-43645400 Weak transcription Primary neutrophils fromperipheralblood blood
37 chr5:43635400-43646000 Weak transcription Cortex derived primary cultured neurospheres brain
38 chr5:43635600-43644600 Weak transcription Rectal Mucosa Donor 29 rectum
39 chr5:43635600-43649000 Weak transcription Brain Germinal Matrix brain
40 chr5:43635800-43643400 Weak transcription Brain Cingulate Gyrus brain
41 chr5:43635800-43644600 Weak transcription Duodenum Smooth Muscle Duodenum
42 chr5:43635800-43647800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr5:43635800-43648400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
44 chr5:43635800-43648400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
45 chr5:43635800-43648600 Weak transcription HSMMtube muscle
46 chr5:43635800-43649200 Weak transcription Pancreas Pancrea
47 chr5:43636000-43644200 Weak transcription Primary T helper naive cells fromperipheralblood blood
48 chr5:43636000-43644600 Weak transcription Fetal Intestine Large intestine
49 chr5:43636000-43646200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr5:43636000-43646200 Weak transcription Stomach Smooth Muscle stomach

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Last update: Aug 31, 2015