The 2.0 version of rSNPBase

Variant report

Variant rs34361701
Chromosome Location chr5:43676004-43676005
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:43650200-43685400 Weak transcription Brain Cingulate Gyrus brain
2 chr5:43650800-43676200 Weak transcription Brain Anterior Caudate brain
3 chr5:43657600-43676200 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr5:43657600-43695200 Weak transcription K562 blood
5 chr5:43659400-43696800 Weak transcription Gastric stomach
6 chr5:43659600-43678200 Weak transcription Brain Hippocampus Middle brain
7 chr5:43659600-43680400 Weak transcription Psoas Muscle Psoas
8 chr5:43659600-43706200 Weak transcription Small Intestine intestine
9 chr5:43659600-43710000 Weak transcription Ovary ovary
10 chr5:43660000-43685600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr5:43660200-43684800 Weak transcription HUES48 Cell Line embryonic stem cell
12 chr5:43661000-43676200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr5:43661000-43677000 Weak transcription Brain Angular Gyrus brain
14 chr5:43661000-43677000 Weak transcription Rectal Smooth Muscle rectum
15 chr5:43661000-43680400 Weak transcription Brain Inferior Temporal Lobe brain
16 chr5:43661000-43680400 Weak transcription Brain Substantia Nigra brain
17 chr5:43661000-43680400 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr5:43661000-43680400 Weak transcription Skeletal Muscle Male skeletal muscle
19 chr5:43661000-43680400 Weak transcription Skeletal Muscle Female skeletal muscle
20 chr5:43661000-43680600 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr5:43661000-43682400 Weak transcription Fetal Muscle Leg muscle
22 chr5:43661000-43682600 Weak transcription Primary neutrophils fromperipheralblood blood
23 chr5:43661000-43683200 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr5:43661000-43695600 Weak transcription Primary T killer naive cells fromperipheralblood blood
25 chr5:43661000-43702800 Weak transcription Primary T helper naive cells from peripheral blood blood
26 chr5:43661000-43711400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr5:43661200-43678400 Weak transcription HUVEC blood vessel
28 chr5:43664000-43676200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr5:43664800-43699800 Weak transcription Colon Smooth Muscle Colon
30 chr5:43665200-43688600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr5:43665200-43690400 Weak transcription Fetal Lung lung
32 chr5:43665200-43702400 Weak transcription Fetal Heart heart
33 chr5:43666400-43676600 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr5:43666600-43676200 Weak transcription Fetal Muscle Trunk muscle
35 chr5:43666600-43677200 Weak transcription Aorta Aorta
36 chr5:43666800-43680400 Weak transcription Breast Myoepithelial Primary Cells Breast
37 chr5:43666800-43696600 Weak transcription Spleen Spleen
38 chr5:43667000-43676200 Weak transcription Primary T helper naive cells fromperipheralblood blood
39 chr5:43667000-43676200 Weak transcription Fetal Thymus thymus
40 chr5:43667000-43677800 Weak transcription Primary T cells fromperipheralblood blood
41 chr5:43667000-43680400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr5:43667000-43680600 Weak transcription Fetal Brain Female brain
43 chr5:43667000-43695000 Weak transcription Cortex derived primary cultured neurospheres brain
44 chr5:43667000-43695600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr5:43667000-43696800 Weak transcription Lung lung
46 chr5:43667000-43703200 Weak transcription Colonic Mucosa Colon
47 chr5:43667200-43676200 Weak transcription Fetal Intestine Large intestine
48 chr5:43667200-43677800 Weak transcription Duodenum Mucosa Duodenum
49 chr5:43667200-43695400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
50 chr5:43667400-43676200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015