The 2.0 version of rSNPBase

Variant report

Variant rs13165656
Chromosome Location chr5:43690964-43690965
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:43657600-43695200 Weak transcription K562 blood
2 chr5:43659400-43696800 Weak transcription Gastric stomach
3 chr5:43659600-43706200 Weak transcription Small Intestine intestine
4 chr5:43659600-43710000 Weak transcription Ovary ovary
5 chr5:43661000-43695600 Weak transcription Primary T killer naive cells fromperipheralblood blood
6 chr5:43661000-43702800 Weak transcription Primary T helper naive cells from peripheral blood blood
7 chr5:43661000-43711400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr5:43664800-43699800 Weak transcription Colon Smooth Muscle Colon
9 chr5:43665200-43702400 Weak transcription Fetal Heart heart
10 chr5:43666800-43696600 Weak transcription Spleen Spleen
11 chr5:43667000-43695000 Weak transcription Cortex derived primary cultured neurospheres brain
12 chr5:43667000-43695600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr5:43667000-43696800 Weak transcription Lung lung
14 chr5:43667000-43703200 Weak transcription Colonic Mucosa Colon
15 chr5:43667200-43695400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr5:43672400-43695800 Weak transcription Esophagus oesophagus
17 chr5:43673400-43695400 Weak transcription Fetal Stomach stomach
18 chr5:43673400-43696400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr5:43674600-43696400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr5:43674600-43699600 Weak transcription Pancreas Pancrea
21 chr5:43675200-43711400 Weak transcription NH-A brain
22 chr5:43676400-43695400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr5:43676400-43703200 Weak transcription Osteobl bone
24 chr5:43676600-43695400 Weak transcription Primary T killer memory cells from peripheral blood blood
25 chr5:43676600-43701200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
26 chr5:43679000-43703600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr5:43679200-43702800 Weak transcription HUVEC blood vessel
28 chr5:43679600-43694200 Weak transcription Primary hematopoietic stem cells blood
29 chr5:43679600-43695200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
30 chr5:43680800-43702400 Weak transcription Hela-S3 cervix
31 chr5:43680800-43715400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
32 chr5:43681000-43693000 Weak transcription Fetal Brain Female brain
33 chr5:43681000-43694200 Weak transcription Primary T helper naive cells fromperipheralblood blood
34 chr5:43681000-43695400 Weak transcription Fetal Thymus thymus
35 chr5:43681000-43696600 Weak transcription Sigmoid Colon Sigmoid Colon
36 chr5:43681000-43703000 Weak transcription HSMM muscle
37 chr5:43681200-43693400 Weak transcription Primary T regulatory cells fromperipheralblood blood
38 chr5:43682000-43694400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr5:43683600-43695200 Weak transcription Fetal Muscle Trunk muscle
40 chr5:43683600-43695400 Weak transcription Primary neutrophils fromperipheralblood blood
41 chr5:43683600-43696600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
42 chr5:43683800-43695000 Weak transcription Primary T cells fromperipheralblood blood
43 chr5:43684000-43701200 Weak transcription HSMMtube muscle
44 chr5:43684200-43695400 Weak transcription Left Ventricle heart
45 chr5:43684200-43695400 Weak transcription Rectal Mucosa Donor 29 rectum
46 chr5:43684200-43695400 Weak transcription Rectal Mucosa Donor 31 rectum
47 chr5:43684200-43695800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
48 chr5:43684200-43696600 Weak transcription Breast Myoepithelial Primary Cells Breast
49 chr5:43684200-43699200 Weak transcription Skeletal Muscle Female skeletal muscle
50 chr5:43684200-43702800 Weak transcription Duodenum Smooth Muscle Duodenum

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Last update: Aug 31, 2015