The 2.0 version of rSNPBase

Variant report

Variant rs10069201
Chromosome Location chr5:43706050-43706051
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:43659600-43706200 Weak transcription Small Intestine intestine
2 chr5:43659600-43710000 Weak transcription Ovary ovary
3 chr5:43661000-43711400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr5:43675200-43711400 Weak transcription NH-A brain
5 chr5:43680800-43715400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
6 chr5:43684200-43715400 Weak transcription Stomach Smooth Muscle stomach
7 chr5:43684800-43714600 Weak transcription Aorta Aorta
8 chr5:43686200-43711400 Weak transcription Muscle Satellite Cultured Cells --
9 chr5:43695800-43707000 Weak transcription K562 blood
10 chr5:43695800-43711400 Weak transcription Right Ventricle heart
11 chr5:43696000-43707200 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr5:43696800-43711600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr5:43697000-43706200 Weak transcription Brain Substantia Nigra brain
14 chr5:43697000-43706200 Weak transcription Esophagus oesophagus
15 chr5:43697000-43710800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
16 chr5:43697000-43711400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr5:43697000-43715000 Weak transcription Brain Cingulate Gyrus brain
18 chr5:43697200-43711400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr5:43698600-43707400 Weak transcription Thymus Thymus
20 chr5:43700000-43706200 Strong transcription Primary T helper cells PMA-I stimulated --
21 chr5:43700000-43706200 Strong transcription Monocytes-CD14+_RO01746 blood
22 chr5:43700200-43706200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr5:43700200-43706400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
24 chr5:43700400-43709200 Weak transcription Pancreas Pancrea
25 chr5:43700600-43711400 Weak transcription HUES6 Cell Line embryonic stem cell
26 chr5:43700800-43706800 Strong transcription Primary hematopoietic stem cells short term culture blood
27 chr5:43701600-43711600 Weak transcription HSMMtube muscle
28 chr5:43701800-43706200 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr5:43701800-43709800 Weak transcription Breast Myoepithelial Primary Cells Breast
30 chr5:43702200-43711400 Weak transcription Placenta Placenta
31 chr5:43702800-43706800 Strong transcription Liver Liver
32 chr5:43703200-43706200 Weak transcription Fetal Intestine Large intestine
33 chr5:43703200-43706200 Weak transcription Fetal Muscle Leg muscle
34 chr5:43703200-43706800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr5:43703200-43710600 Weak transcription Psoas Muscle Psoas
36 chr5:43703400-43708200 Weak transcription Primary T killer memory cells from peripheral blood blood
37 chr5:43703400-43708200 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr5:43703400-43709600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
39 chr5:43703400-43709600 Weak transcription Colon Smooth Muscle Colon
40 chr5:43703400-43711400 Weak transcription NHDF-Ad bronchial
41 chr5:43703400-43711400 Weak transcription NHLF lung
42 chr5:43703400-43712800 Weak transcription Brain Anterior Caudate brain
43 chr5:43704000-43711000 Weak transcription Hela-S3 cervix
44 chr5:43704400-43711800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr5:43704600-43707400 Weak transcription Primary B cells from cord blood blood
46 chr5:43704600-43707400 Weak transcription Lung lung
47 chr5:43704600-43708400 Weak transcription Duodenum Mucosa Duodenum
48 chr5:43704600-43709800 Weak transcription HUVEC blood vessel
49 chr5:43704600-43711600 Weak transcription Osteobl bone
50 chr5:43704800-43707200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015