The 2.0 version of rSNPBase

Variant report

Variant rs13183124
Chromosome Location chr5:43685588-43685589
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:43657600-43695200 Weak transcription K562 blood
2 chr5:43659400-43696800 Weak transcription Gastric stomach
3 chr5:43659600-43706200 Weak transcription Small Intestine intestine
4 chr5:43659600-43710000 Weak transcription Ovary ovary
5 chr5:43660000-43685600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr5:43661000-43695600 Weak transcription Primary T killer naive cells fromperipheralblood blood
7 chr5:43661000-43702800 Weak transcription Primary T helper naive cells from peripheral blood blood
8 chr5:43661000-43711400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr5:43664800-43699800 Weak transcription Colon Smooth Muscle Colon
10 chr5:43665200-43688600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr5:43665200-43690400 Weak transcription Fetal Lung lung
12 chr5:43665200-43702400 Weak transcription Fetal Heart heart
13 chr5:43666800-43696600 Weak transcription Spleen Spleen
14 chr5:43667000-43695000 Weak transcription Cortex derived primary cultured neurospheres brain
15 chr5:43667000-43695600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr5:43667000-43696800 Weak transcription Lung lung
17 chr5:43667000-43703200 Weak transcription Colonic Mucosa Colon
18 chr5:43667200-43695400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
19 chr5:43672400-43695800 Weak transcription Esophagus oesophagus
20 chr5:43673400-43695400 Weak transcription Fetal Stomach stomach
21 chr5:43673400-43696400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr5:43673600-43687800 Strong transcription Monocytes-CD14+_RO01746 blood
23 chr5:43674200-43686000 Strong transcription Dnd41 blood
24 chr5:43674600-43696400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr5:43674600-43699600 Weak transcription Pancreas Pancrea
26 chr5:43675200-43711400 Weak transcription NH-A brain
27 chr5:43675400-43687800 Strong transcription Primary monocytes fromperipheralblood blood
28 chr5:43676400-43687400 Weak transcription NHEK skin
29 chr5:43676400-43695400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
30 chr5:43676400-43703200 Weak transcription Osteobl bone
31 chr5:43676600-43695400 Weak transcription Primary T killer memory cells from peripheral blood blood
32 chr5:43676600-43701200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
33 chr5:43676800-43685600 Weak transcription GM12878-XiMat blood
34 chr5:43676800-43685600 Weak transcription NHLF lung
35 chr5:43679000-43703600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr5:43679200-43702800 Weak transcription HUVEC blood vessel
37 chr5:43679600-43694200 Weak transcription Primary hematopoietic stem cells blood
38 chr5:43679600-43695200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
39 chr5:43680600-43688400 Strong transcription Primary B cells from cord blood blood
40 chr5:43680800-43686800 Weak transcription Brain Inferior Temporal Lobe brain
41 chr5:43680800-43702400 Weak transcription Hela-S3 cervix
42 chr5:43680800-43715400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr5:43681000-43685600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr5:43681000-43693000 Weak transcription Fetal Brain Female brain
45 chr5:43681000-43694200 Weak transcription Primary T helper naive cells fromperipheralblood blood
46 chr5:43681000-43695400 Weak transcription Fetal Thymus thymus
47 chr5:43681000-43696600 Weak transcription Sigmoid Colon Sigmoid Colon
48 chr5:43681000-43703000 Weak transcription HSMM muscle
49 chr5:43681200-43693400 Weak transcription Primary T regulatory cells fromperipheralblood blood
50 chr5:43681800-43687000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015