The 2.0 version of rSNPBase

Variant report

Variant rs62368568
Chromosome Location chr5:43672661-43672662
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:43650200-43685400 Weak transcription Brain Cingulate Gyrus brain
2 chr5:43650600-43673000 Weak transcription Right Ventricle heart
3 chr5:43650800-43673200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr5:43650800-43676200 Weak transcription Brain Anterior Caudate brain
5 chr5:43653000-43675600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
6 chr5:43653400-43674200 Weak transcription HSMMtube muscle
7 chr5:43657000-43674400 Weak transcription Pancreas Pancrea
8 chr5:43657600-43676200 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr5:43657600-43695200 Weak transcription K562 blood
10 chr5:43659400-43696800 Weak transcription Gastric stomach
11 chr5:43659600-43675400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
12 chr5:43659600-43678200 Weak transcription Brain Hippocampus Middle brain
13 chr5:43659600-43680400 Weak transcription Psoas Muscle Psoas
14 chr5:43659600-43706200 Weak transcription Small Intestine intestine
15 chr5:43659600-43710000 Weak transcription Ovary ovary
16 chr5:43660000-43685600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr5:43660200-43684800 Weak transcription HUES48 Cell Line embryonic stem cell
18 chr5:43661000-43673200 Weak transcription Stomach Smooth Muscle stomach
19 chr5:43661000-43675600 Weak transcription Primary T cells from cord blood blood
20 chr5:43661000-43675600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
21 chr5:43661000-43675600 Weak transcription Fetal Kidney kidney
22 chr5:43661000-43675600 Weak transcription Left Ventricle heart
23 chr5:43661000-43676200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr5:43661000-43677000 Weak transcription Brain Angular Gyrus brain
25 chr5:43661000-43677000 Weak transcription Rectal Smooth Muscle rectum
26 chr5:43661000-43680400 Weak transcription Brain Inferior Temporal Lobe brain
27 chr5:43661000-43680400 Weak transcription Brain Substantia Nigra brain
28 chr5:43661000-43680400 Weak transcription Rectal Mucosa Donor 31 rectum
29 chr5:43661000-43680400 Weak transcription Skeletal Muscle Male skeletal muscle
30 chr5:43661000-43680400 Weak transcription Skeletal Muscle Female skeletal muscle
31 chr5:43661000-43680600 Weak transcription Rectal Mucosa Donor 29 rectum
32 chr5:43661000-43682400 Weak transcription Fetal Muscle Leg muscle
33 chr5:43661000-43682600 Weak transcription Primary neutrophils fromperipheralblood blood
34 chr5:43661000-43683200 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr5:43661000-43695600 Weak transcription Primary T killer naive cells fromperipheralblood blood
36 chr5:43661000-43702800 Weak transcription Primary T helper naive cells from peripheral blood blood
37 chr5:43661000-43711400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr5:43661200-43678400 Weak transcription HUVEC blood vessel
39 chr5:43661600-43675600 Weak transcription Primary T helper cells PMA-I stimulated --
40 chr5:43662400-43675400 Weak transcription Hela-S3 cervix
41 chr5:43664000-43674200 Weak transcription Primary B cells from cord blood blood
42 chr5:43664000-43676200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr5:43664600-43675800 Weak transcription Liver Liver
44 chr5:43664800-43699800 Weak transcription Colon Smooth Muscle Colon
45 chr5:43665200-43674200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr5:43665200-43674200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr5:43665200-43674200 Weak transcription Muscle Satellite Cultured Cells --
48 chr5:43665200-43674400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr5:43665200-43675600 Weak transcription Primary T helper cells fromperipheralblood blood
50 chr5:43665200-43676000 Weak transcription Primary T regulatory cells fromperipheralblood blood

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Last update: Aug 31, 2015