The 2.0 version of rSNPBase

Variant report

Variant rs62368581
Chromosome Location chr5:43707789-43707790
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:43659600-43710000 Weak transcription Ovary ovary
2 chr5:43661000-43711400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr5:43675200-43711400 Weak transcription NH-A brain
4 chr5:43680800-43715400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
5 chr5:43684200-43715400 Weak transcription Stomach Smooth Muscle stomach
6 chr5:43684800-43714600 Weak transcription Aorta Aorta
7 chr5:43686200-43711400 Weak transcription Muscle Satellite Cultured Cells --
8 chr5:43695800-43711400 Weak transcription Right Ventricle heart
9 chr5:43696800-43711600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr5:43697000-43710800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr5:43697000-43711400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr5:43697000-43715000 Weak transcription Brain Cingulate Gyrus brain
13 chr5:43697200-43711400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr5:43700400-43709200 Weak transcription Pancreas Pancrea
15 chr5:43700600-43711400 Weak transcription HUES6 Cell Line embryonic stem cell
16 chr5:43701600-43711600 Weak transcription HSMMtube muscle
17 chr5:43701800-43709800 Weak transcription Breast Myoepithelial Primary Cells Breast
18 chr5:43702200-43711400 Weak transcription Placenta Placenta
19 chr5:43703200-43710600 Weak transcription Psoas Muscle Psoas
20 chr5:43703400-43708200 Weak transcription Primary T killer memory cells from peripheral blood blood
21 chr5:43703400-43708200 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr5:43703400-43709600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
23 chr5:43703400-43709600 Weak transcription Colon Smooth Muscle Colon
24 chr5:43703400-43711400 Weak transcription NHDF-Ad bronchial
25 chr5:43703400-43711400 Weak transcription NHLF lung
26 chr5:43703400-43712800 Weak transcription Brain Anterior Caudate brain
27 chr5:43704000-43711000 Weak transcription Hela-S3 cervix
28 chr5:43704400-43711800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr5:43704600-43708400 Weak transcription Duodenum Mucosa Duodenum
30 chr5:43704600-43709800 Weak transcription HUVEC blood vessel
31 chr5:43704600-43711600 Weak transcription Osteobl bone
32 chr5:43704800-43715200 Weak transcription Fetal Muscle Trunk muscle
33 chr5:43705000-43711600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr5:43705000-43715600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
35 chr5:43705400-43711400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr5:43705600-43708000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
37 chr5:43705600-43708200 Weak transcription Primary T helper naive cells from peripheral blood blood
38 chr5:43705600-43708200 Weak transcription Rectal Mucosa Donor 31 rectum
39 chr5:43705600-43709400 Weak transcription Adipose Nuclei Adipose
40 chr5:43705600-43710000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr5:43705600-43711400 Weak transcription HSMM muscle
42 chr5:43705600-43711600 Weak transcription Fetal Lung lung
43 chr5:43705600-43713000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
44 chr5:43705800-43708200 Weak transcription Primary monocytes fromperipheralblood blood
45 chr5:43705800-43709200 Weak transcription Dnd41 blood
46 chr5:43705800-43711400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr5:43706000-43707800 Weak transcription Primary hematopoietic stem cells blood
48 chr5:43706000-43707800 Weak transcription Primary T killer naive cells fromperipheralblood blood
49 chr5:43706000-43708000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
50 chr5:43706000-43708200 Weak transcription Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015