The 2.0 version of rSNPBase

Variant report

Variant rs13158796
Chromosome Location chr5:43597946-43597947
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:43565400-43601800 Weak transcription Fetal Thymus thymus
2 chr5:43567400-43602000 Weak transcription Brain Inferior Temporal Lobe brain
3 chr5:43568000-43601800 Weak transcription Primary B cells from peripheral blood blood
4 chr5:43568000-43602400 Weak transcription Pancreas Pancrea
5 chr5:43568600-43601800 Weak transcription Fetal Brain Female brain
6 chr5:43569000-43601400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
7 chr5:43570200-43601800 Weak transcription Right Ventricle heart
8 chr5:43572000-43602400 Weak transcription Ovary ovary
9 chr5:43573000-43601800 Weak transcription Breast Myoepithelial Primary Cells Breast
10 chr5:43573000-43601800 Weak transcription Primary T cells fromperipheralblood blood
11 chr5:43574000-43601800 Weak transcription Brain Anterior Caudate brain
12 chr5:43574400-43600800 Weak transcription Primary T helper cells fromperipheralblood blood
13 chr5:43575000-43601400 Weak transcription Primary T helper naive cells fromperipheralblood blood
14 chr5:43576400-43601400 Weak transcription Cortex derived primary cultured neurospheres brain
15 chr5:43577200-43601800 Weak transcription Fetal Stomach stomach
16 chr5:43577600-43601600 Weak transcription Primary B cells from cord blood blood
17 chr5:43579400-43601800 Weak transcription Fetal Adrenal Gland Adrenal Gland
18 chr5:43582000-43600600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
19 chr5:43582400-43601800 Weak transcription Fetal Muscle Trunk muscle
20 chr5:43582800-43601800 Weak transcription Fetal Intestine Large intestine
21 chr5:43583000-43599800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr5:43583400-43601600 Weak transcription Primary hematopoietic stem cells blood
23 chr5:43583400-43601800 Weak transcription Fetal Lung lung
24 chr5:43583600-43600600 Weak transcription Dnd41 blood
25 chr5:43583800-43601800 Weak transcription Primary T cells from cord blood blood
26 chr5:43585000-43600600 Weak transcription K562 blood
27 chr5:43585600-43598200 Weak transcription Psoas Muscle Psoas
28 chr5:43585600-43599800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
29 chr5:43588400-43601400 Weak transcription Fetal Intestine Small intestine
30 chr5:43589400-43599600 Weak transcription Skeletal Muscle Male skeletal muscle
31 chr5:43589600-43601600 Weak transcription Fetal Brain Male brain
32 chr5:43589800-43599600 Weak transcription Skeletal Muscle Female skeletal muscle
33 chr5:43590600-43600400 Weak transcription HepG2 liver
34 chr5:43592200-43600000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
35 chr5:43592600-43601800 Weak transcription Fetal Muscle Leg muscle
36 chr5:43593000-43601400 Weak transcription NHLF lung
37 chr5:43593200-43600600 Weak transcription GM12878-XiMat blood
38 chr5:43593400-43601000 Weak transcription Primary hematopoietic stem cells short term culture blood
39 chr5:43595200-43599600 Weak transcription Fetal Heart heart
40 chr5:43595800-43599600 Weak transcription Left Ventricle heart
41 chr5:43596000-43601800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr5:43597600-43601600 Weak transcription NHDF-Ad bronchial
43 chr5:43597800-43598600 Enhancers Liver Liver

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Last update: Aug 31, 2015