Variant report
| Variant | rs16873432 |
|---|---|
| Chromosome Location | chr5:43647709-43647710 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:43604400-43649200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 2 | chr5:43604400-43649200 | Weak transcription | Esophagus | oesophagus |
| 3 | chr5:43604400-43660600 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 4 | chr5:43604600-43649800 | Weak transcription | Colonic Mucosa | Colon |
| 5 | chr5:43604800-43649800 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 6 | chr5:43605000-43656000 | Weak transcription | Small Intestine | intestine |
| 7 | chr5:43606800-43648200 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 8 | chr5:43610800-43649400 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 9 | chr5:43612600-43649400 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 10 | chr5:43616000-43648200 | Weak transcription | HepG2 | liver |
| 11 | chr5:43620200-43650600 | Weak transcription | Placenta | Placenta |
| 12 | chr5:43621200-43650200 | Weak transcription | NHEK | skin |
| 13 | chr5:43621600-43651800 | Weak transcription | HMEC | breast |
| 14 | chr5:43621800-43667400 | Strong transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 15 | chr5:43622200-43648200 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 16 | chr5:43624200-43649200 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 17 | chr5:43630200-43648800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 18 | chr5:43630200-43658800 | Weak transcription | Stomach Mucosa | stomach |
| 19 | chr5:43631600-43649200 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 20 | chr5:43631600-43651400 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 21 | chr5:43631600-43664200 | Weak transcription | A549 | lung |
| 22 | chr5:43633000-43649200 | Weak transcription | Ovary | ovary |
| 23 | chr5:43633800-43648600 | Weak transcription | Fetal Stomach | stomach |
| 24 | chr5:43634200-43648400 | Weak transcription | HUVEC | blood vessel |
| 25 | chr5:43635000-43650000 | Weak transcription | K562 | blood |
| 26 | chr5:43635200-43648000 | Weak transcription | Fetal Lung | lung |
| 27 | chr5:43635600-43649000 | Weak transcription | Brain Germinal Matrix | brain |
| 28 | chr5:43635800-43647800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 29 | chr5:43635800-43648400 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 30 | chr5:43635800-43648400 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 31 | chr5:43635800-43648600 | Weak transcription | HSMMtube | muscle |
| 32 | chr5:43635800-43649200 | Weak transcription | Pancreas | Pancrea |
| 33 | chr5:43636000-43648200 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 34 | chr5:43636000-43648600 | Weak transcription | Spleen | Spleen |
| 35 | chr5:43636400-43649600 | Weak transcription | NHLF | lung |
| 36 | chr5:43636400-43664200 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 37 | chr5:43636600-43648600 | Weak transcription | Rectal Smooth Muscle | rectum |
| 38 | chr5:43637800-43649200 | Weak transcription | Aorta | Aorta |
| 39 | chr5:43637800-43649800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 40 | chr5:43638000-43648000 | Weak transcription | Thymus | Thymus |
| 41 | chr5:43638200-43648400 | Weak transcription | Lung | lung |
| 42 | chr5:43638200-43659200 | Weak transcription | Colon Smooth Muscle | Colon |
| 43 | chr5:43639200-43665400 | Strong transcription | Primary monocytes fromperipheralblood | blood |
| 44 | chr5:43640000-43665400 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 45 | chr5:43640400-43647800 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 46 | chr5:43642400-43648400 | Weak transcription | Right Ventricle | heart |
| 47 | chr5:43642400-43648600 | Weak transcription | Gastric | stomach |
| 48 | chr5:43642600-43649400 | Weak transcription | Fetal Heart | heart |
| 49 | chr5:43642800-43648000 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 50 | chr5:43642800-43648200 | Weak transcription | Brain Anterior Caudate | brain |
