Variant report

Variant rs71629184
Chromosome Location chr5:43650289-43650290
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:43604400-43660600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr5:43605000-43656000 Weak transcription Small Intestine intestine
3 chr5:43620200-43650600 Weak transcription Placenta Placenta
4 chr5:43621600-43651800 Weak transcription HMEC breast
5 chr5:43621800-43667400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
6 chr5:43630200-43658800 Weak transcription Stomach Mucosa stomach
7 chr5:43631600-43651400 Weak transcription iPS-15b Cell Line embryonic stem cell
8 chr5:43631600-43664200 Weak transcription A549 lung
9 chr5:43636400-43664200 Weak transcription Pancreatic Islets Pancreatic Islet
10 chr5:43638200-43659200 Weak transcription Colon Smooth Muscle Colon
11 chr5:43639200-43665400 Strong transcription Primary monocytes fromperipheralblood blood
12 chr5:43640000-43665400 Strong transcription Monocytes-CD14+_RO01746 blood
13 chr5:43642800-43661200 Strong transcription Primary T regulatory cells fromperipheralblood blood
14 chr5:43642800-43665800 Weak transcription H1 Cell Line embryonic stem cell
15 chr5:43643200-43652000 Strong transcription Liver Liver
16 chr5:43643200-43661000 Strong transcription Duodenum Mucosa Duodenum
17 chr5:43643200-43661400 Strong transcription Primary T cells fromperipheralblood blood
18 chr5:43643200-43661600 Strong transcription Primary T helper cells PMA-I stimulated --
19 chr5:43643400-43665800 Strong transcription Primary hematopoietic stem cells short term culture blood
20 chr5:43643600-43665200 Strong transcription Primary T helper cells fromperipheralblood blood
21 chr5:43643800-43664600 Strong transcription Dnd41 blood
22 chr5:43644200-43660600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr5:43644200-43664000 Strong transcription Primary T helper naive cells fromperipheralblood blood
24 chr5:43644600-43657400 Strong transcription Duodenum Smooth Muscle Duodenum
25 chr5:43644600-43660000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr5:43644600-43661000 Strong transcription Rectal Mucosa Donor 29 rectum
27 chr5:43644600-43661400 Strong transcription Fetal Muscle Trunk muscle
28 chr5:43644800-43653000 Strong transcription Skeletal Muscle Female skeletal muscle
29 chr5:43644800-43660600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
30 chr5:43644800-43666400 Strong transcription Primary B cells from peripheral blood blood
31 chr5:43645400-43660600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr5:43645400-43661000 Strong transcription Breast Myoepithelial Primary Cells Breast
33 chr5:43645400-43661000 Strong transcription Primary neutrophils fromperipheralblood blood
34 chr5:43645400-43661400 Strong transcription Fetal Thymus thymus
35 chr5:43646000-43657400 Strong transcription GM12878-XiMat blood
36 chr5:43646000-43661000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
37 chr5:43646200-43657200 Strong transcription Primary T cells from cord blood blood
38 chr5:43646400-43661400 Weak transcription H9 Cell Line embryonic stem cell
39 chr5:43646600-43657400 Strong transcription Fetal Intestine Large intestine
40 chr5:43646800-43655000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr5:43647000-43650400 Genic enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr5:43647000-43653400 Strong transcription Primary B cells from cord blood blood
43 chr5:43647000-43662400 Strong transcription Hela-S3 cervix
44 chr5:43647000-43664200 Weak transcription iPS-18 Cell Line embryonic stem cell
45 chr5:43647400-43651800 Weak transcription HUES6 Cell Line embryonic stem cell
46 chr5:43647800-43650600 Strong transcription Fetal Kidney kidney
47 chr5:43647800-43650800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr5:43647800-43652400 Strong transcription Skeletal Muscle Male skeletal muscle
49 chr5:43647800-43657600 Strong transcription Rectal Mucosa Donor 31 rectum
50 chr5:43647800-43661400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin

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