Variant report

Variant	rs721991
Chromosome Location	chr10:61539660-61539661
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 40 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:40)

rs_ID	r²[population]
rs10509112	0.95[JPT][hapmap];0.86[ASN][1000 genomes]
rs10761414	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs10761415	0.89[CEU][hapmap];0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs10761417	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs10821596	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10821601	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs10821603	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs10994008	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10994024	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12259529	0.95[JPT][hapmap];0.88[ASN][1000 genomes]
rs12261561	0.89[ASN][1000 genomes]
rs12262735	0.95[JPT][hapmap];0.87[ASN][1000 genomes]
rs12572724	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1877793	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1877796	0.96[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1913512	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1913513	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1913514	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1955321	0.83[CEU][hapmap];0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2090121	0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2393572	0.89[CEU][hapmap];0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs3793880	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4387309	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4948242	0.90[CEU][hapmap];0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4948243	0.85[CEU][hapmap];0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4948244	1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs4948364	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4948365	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4948366	0.90[CEU][hapmap];0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4948375	0.80[JPT][hapmap]
rs56330865	0.89[ASN][1000 genomes]
rs58643066	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7069589	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7075215	0.82[CEU][hapmap];0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7079829	0.83[CEU][hapmap];0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7099368	0.89[CEU][hapmap];0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs721992	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7894842	0.89[CEU][hapmap];0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7909766	0.90[CEU][hapmap];0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs9971121	0.87[CEU][hapmap];0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:61537600-61582800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr10:61538600-61541400	Enhancers	HSMMtube	muscle
3	chr10:61538800-61541000	Enhancers	Fetal Muscle Leg	muscle
4	chr10:61539000-61540200	Enhancers	Fetal Muscle Trunk	muscle
5	chr10:61539000-61540200	Enhancers	Ovary	ovary
6	chr10:61539200-61540200	Enhancers	Muscle Satellite Cultured Cells	--
7	chr10:61539200-61540200	Enhancers	NH-A	brain
8	chr10:61539200-61540800	Enhancers	Skeletal Muscle Male	skeletal muscle
9	chr10:61539400-61540000	Enhancers	Fetal Lung	lung
10	chr10:61539400-61540200	Enhancers	Brain Germinal Matrix	brain
11	chr10:61539400-61540200	Enhancers	Fetal Stomach	stomach
12	chr10:61539400-61540200	Enhancers	Right Atrium	heart
13	chr10:61539600-61540000	Enhancers	Brain Cingulate Gyrus	brain
14	chr10:61539600-61540000	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
15	chr10:61539600-61540000	Flanking Active TSS	HSMM	muscle
16	chr10:61539600-61540800	Enhancers	Psoas Muscle	Psoas

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