The 2.0 version of rSNPBase

Variant report

Variant rs72619912
Chromosome Location chr3:24168622-24168623
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:24155800-24169600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr3:24156400-24187800 Weak transcription Brain Inferior Temporal Lobe brain
3 chr3:24157400-24173000 Weak transcription Duodenum Smooth Muscle Duodenum
4 chr3:24158800-24169800 Strong transcription Breast Myoepithelial Primary Cells Breast
5 chr3:24158800-24170200 Strong transcription Liver Liver
6 chr3:24159800-24169600 Weak transcription Colon Smooth Muscle Colon
7 chr3:24160400-24173000 Weak transcription Primary hematopoietic stem cells blood
8 chr3:24161000-24170200 Strong transcription Fetal Intestine Small intestine
9 chr3:24161200-24173000 Weak transcription Fetal Adrenal Gland Adrenal Gland
10 chr3:24161200-24176400 Weak transcription Pancreas Pancrea
11 chr3:24161400-24169000 Weak transcription Esophagus oesophagus
12 chr3:24161400-24169600 Weak transcription Gastric stomach
13 chr3:24161400-24169600 Weak transcription Lung lung
14 chr3:24161400-24170600 Weak transcription Psoas Muscle Psoas
15 chr3:24161800-24173000 Weak transcription Placenta Amnion Placenta Amnion
16 chr3:24162400-24170000 Weak transcription Rectal Smooth Muscle rectum
17 chr3:24162800-24178200 Weak transcription Spleen Spleen
18 chr3:24164400-24169600 Weak transcription Left Ventricle heart
19 chr3:24165000-24173400 Weak transcription Right Ventricle heart
20 chr3:24165200-24169600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr3:24165200-24169600 Weak transcription Skeletal Muscle Male skeletal muscle
22 chr3:24165200-24173200 Weak transcription Placenta Placenta
23 chr3:24165400-24168800 Weak transcription Hela-S3 cervix
24 chr3:24165400-24169400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
25 chr3:24165400-24169400 Weak transcription HMEC breast
26 chr3:24165600-24169400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr3:24165600-24169600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr3:24165600-24169600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr3:24165600-24169600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr3:24165600-24169600 Weak transcription Right Atrium heart
31 chr3:24165600-24170000 Weak transcription Osteobl bone
32 chr3:24165800-24169000 Weak transcription NHLF lung
33 chr3:24165800-24169200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
34 chr3:24165800-24169400 Weak transcription Muscle Satellite Cultured Cells --
35 chr3:24165800-24169800 Weak transcription HSMM muscle
36 chr3:24165800-24169800 Weak transcription HSMMtube muscle
37 chr3:24165800-24171400 Weak transcription Rectal Mucosa Donor 29 rectum
38 chr3:24165800-24179000 Weak transcription Duodenum Mucosa Duodenum
39 chr3:24166400-24169400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr3:24166400-24169600 Weak transcription NHDF-Ad bronchial
41 chr3:24167000-24197800 Weak transcription K562 blood
42 chr3:24167200-24169400 Strong transcription Skeletal Muscle Female skeletal muscle
43 chr3:24167400-24169200 Weak transcription Fetal Lung lung
44 chr3:24167400-24169200 Strong transcription Stomach Smooth Muscle stomach
45 chr3:24167600-24169200 Strong transcription Fetal Stomach stomach
46 chr3:24167800-24187800 Weak transcription Small Intestine intestine
47 chr3:24168000-24169200 Strong transcription Adipose Nuclei Adipose
48 chr3:24168000-24169200 Strong transcription Aorta Aorta
49 chr3:24168200-24168800 Strong transcription Brain Angular Gyrus brain
50 chr3:24168200-24169000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --

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Last update: Aug 31, 2015