The 2.0 version of rSNPBase

Variant report

Variant rs72619913
Chromosome Location chr3:24175261-24175262
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:24156400-24187800 Weak transcription Brain Inferior Temporal Lobe brain
2 chr3:24161200-24176400 Weak transcription Pancreas Pancrea
3 chr3:24162800-24178200 Weak transcription Spleen Spleen
4 chr3:24165800-24179000 Weak transcription Duodenum Mucosa Duodenum
5 chr3:24167000-24197800 Weak transcription K562 blood
6 chr3:24167800-24187800 Weak transcription Small Intestine intestine
7 chr3:24168600-24179200 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr3:24168800-24181200 Weak transcription Brain Angular Gyrus brain
9 chr3:24169000-24187800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr3:24169800-24186200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr3:24170000-24176000 Weak transcription Lung lung
12 chr3:24170000-24178200 Weak transcription Gastric stomach
13 chr3:24170200-24178200 Weak transcription Stomach Mucosa stomach
14 chr3:24170800-24184600 Weak transcription Brain Anterior Caudate brain
15 chr3:24171000-24176400 Strong transcription Liver Liver
16 chr3:24171000-24177400 Strong transcription Fetal Intestine Small intestine
17 chr3:24171000-24178200 Weak transcription Muscle Satellite Cultured Cells --
18 chr3:24171200-24176400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr3:24171200-24176400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr3:24171200-24176800 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr3:24171400-24186200 Strong transcription Fetal Intestine Large intestine
22 chr3:24171600-24176000 Strong transcription Aorta Aorta
23 chr3:24171600-24176400 Weak transcription NHLF lung
24 chr3:24171600-24176600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
25 chr3:24171600-24178800 Weak transcription HMEC breast
26 chr3:24171600-24179200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr3:24172000-24178200 Weak transcription Psoas Muscle Psoas
28 chr3:24172200-24176000 Strong transcription Adipose Nuclei Adipose
29 chr3:24172600-24176600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr3:24173000-24176600 Strong transcription Skeletal Muscle Female skeletal muscle
31 chr3:24173000-24187400 Weak transcription Fetal Brain Male brain
32 chr3:24173600-24175400 Weak transcription Placenta Placenta
33 chr3:24173600-24179000 Weak transcription HepG2 liver
34 chr3:24173600-24179400 Weak transcription Esophagus oesophagus
35 chr3:24173600-24188200 Weak transcription Primary hematopoietic stem cells blood
36 chr3:24173800-24176200 Weak transcription NHDF-Ad bronchial
37 chr3:24173800-24176400 Strong transcription Breast Myoepithelial Primary Cells Breast
38 chr3:24173800-24183200 Weak transcription Fetal Adrenal Gland Adrenal Gland
39 chr3:24174000-24183400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr3:24174200-24176200 Strong transcription Rectal Mucosa Donor 31 rectum
41 chr3:24174200-24182800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr3:24174400-24176200 Weak transcription Right Ventricle heart
43 chr3:24174400-24184800 Weak transcription Rectal Mucosa Donor 29 rectum
44 chr3:24174600-24175400 Strong transcription Left Ventricle heart
45 chr3:24174600-24175600 Enhancers Fetal Lung lung
46 chr3:24174600-24176600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr3:24174600-24176600 Weak transcription Placenta Amnion Placenta Amnion
48 chr3:24174800-24177000 Genic enhancers Fetal Stomach stomach
49 chr3:24174800-24177400 Enhancers Colon Smooth Muscle Colon
50 chr3:24174800-24178400 Weak transcription Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015