The 2.0 version of rSNPBase

Variant report

Variant rs72619908
Chromosome Location chr3:24164268-24164269
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:24155800-24169600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr3:24156400-24187800 Weak transcription Brain Inferior Temporal Lobe brain
3 chr3:24157400-24173000 Weak transcription Duodenum Smooth Muscle Duodenum
4 chr3:24158800-24169800 Strong transcription Breast Myoepithelial Primary Cells Breast
5 chr3:24158800-24170200 Strong transcription Liver Liver
6 chr3:24159600-24167600 Weak transcription Fetal Stomach stomach
7 chr3:24159800-24168200 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr3:24159800-24169600 Weak transcription Colon Smooth Muscle Colon
9 chr3:24160000-24168200 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr3:24160400-24173000 Weak transcription Primary hematopoietic stem cells blood
11 chr3:24161000-24170200 Strong transcription Fetal Intestine Small intestine
12 chr3:24161200-24164400 Weak transcription NHDF-Ad bronchial
13 chr3:24161200-24164600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr3:24161200-24164600 Weak transcription Muscle Satellite Cultured Cells --
15 chr3:24161200-24164600 Weak transcription Right Ventricle heart
16 chr3:24161200-24164800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr3:24161200-24165000 Weak transcription Osteobl bone
18 chr3:24161200-24167200 Weak transcription Skeletal Muscle Female skeletal muscle
19 chr3:24161200-24173000 Weak transcription Fetal Adrenal Gland Adrenal Gland
20 chr3:24161200-24176400 Weak transcription Pancreas Pancrea
21 chr3:24161400-24164400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
22 chr3:24161400-24164400 Weak transcription NHLF lung
23 chr3:24161400-24164600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr3:24161400-24164600 Weak transcription A549 lung
25 chr3:24161400-24164800 Weak transcription HMEC breast
26 chr3:24161400-24169000 Weak transcription Esophagus oesophagus
27 chr3:24161400-24169600 Weak transcription Gastric stomach
28 chr3:24161400-24169600 Weak transcription Lung lung
29 chr3:24161400-24170600 Weak transcription Psoas Muscle Psoas
30 chr3:24161800-24173000 Weak transcription Placenta Amnion Placenta Amnion
31 chr3:24162000-24168200 Weak transcription Brain Angular Gyrus brain
32 chr3:24162200-24164600 Weak transcription Hela-S3 cervix
33 chr3:24162400-24170000 Weak transcription Rectal Smooth Muscle rectum
34 chr3:24162600-24168200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
35 chr3:24162800-24178200 Weak transcription Spleen Spleen
36 chr3:24163000-24164800 Strong transcription Aorta Aorta
37 chr3:24163000-24165800 Strong transcription Fetal Intestine Large intestine
38 chr3:24163000-24168400 Weak transcription HepG2 liver
39 chr3:24163200-24165600 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr3:24163800-24164400 Strong transcription Adipose Nuclei Adipose
41 chr3:24163800-24165000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr3:24163800-24165200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr3:24163800-24165200 Strong transcription Skeletal Muscle Male skeletal muscle
44 chr3:24164000-24164400 Strong transcription Left Ventricle heart
45 chr3:24164000-24164600 Strong transcription Fetal Lung lung
46 chr3:24164000-24164600 Strong transcription Stomach Smooth Muscle stomach
47 chr3:24164000-24165200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr3:24164200-24165800 Enhancers HSMMtube muscle

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Last update: Aug 31, 2015