The 2.0 version of rSNPBase

Variant report

Variant rs72619920
Chromosome Location chr3:24185519-24185520
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:24156400-24187800 Weak transcription Brain Inferior Temporal Lobe brain
2 chr3:24167000-24197800 Weak transcription K562 blood
3 chr3:24167800-24187800 Weak transcription Small Intestine intestine
4 chr3:24169000-24187800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr3:24169800-24186200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr3:24171400-24186200 Strong transcription Fetal Intestine Large intestine
7 chr3:24173000-24187400 Weak transcription Fetal Brain Male brain
8 chr3:24173600-24188200 Weak transcription Primary hematopoietic stem cells blood
9 chr3:24175800-24187800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr3:24176800-24186400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
11 chr3:24177200-24186200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr3:24177200-24186200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr3:24177200-24186200 Weak transcription Placenta Placenta
14 chr3:24178400-24186200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr3:24179000-24186200 Weak transcription NHLF lung
16 chr3:24179800-24187800 Weak transcription Spleen Spleen
17 chr3:24180000-24186400 Weak transcription Duodenum Mucosa Duodenum
18 chr3:24180000-24206600 Weak transcription Pancreas Pancrea
19 chr3:24180200-24187000 Weak transcription Right Ventricle heart
20 chr3:24180400-24186200 Weak transcription Stomach Mucosa stomach
21 chr3:24180400-24186200 Weak transcription HSMMtube muscle
22 chr3:24180600-24186400 Strong transcription Breast Myoepithelial Primary Cells Breast
23 chr3:24180600-24186800 Weak transcription HMEC breast
24 chr3:24181200-24186000 Weak transcription NHDF-Ad bronchial
25 chr3:24181200-24187800 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr3:24181200-24187800 Weak transcription Right Atrium heart
27 chr3:24181400-24187800 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr3:24181600-24186200 Weak transcription HSMM muscle
29 chr3:24182000-24186200 Weak transcription Muscle Satellite Cultured Cells --
30 chr3:24182000-24188000 Weak transcription Pancreatic Islets Pancreatic Islet
31 chr3:24182000-24194400 Weak transcription Fetal Kidney kidney
32 chr3:24182600-24186600 Strong transcription Liver Liver
33 chr3:24183200-24186400 Strong transcription Fetal Intestine Small intestine
34 chr3:24183400-24198000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
35 chr3:24183800-24186800 Weak transcription Colon Smooth Muscle Colon
36 chr3:24183800-24187400 Weak transcription Fetal Adrenal Gland Adrenal Gland
37 chr3:24183800-24187400 Weak transcription Rectal Smooth Muscle rectum
38 chr3:24184000-24186200 Weak transcription Placenta Amnion Placenta Amnion
39 chr3:24184000-24187000 Weak transcription Brain Angular Gyrus brain
40 chr3:24184200-24186200 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr3:24184200-24187000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr3:24184600-24196200 Weak transcription HepG2 liver
43 chr3:24185000-24185600 Strong transcription Fetal Stomach stomach
44 chr3:24185000-24185600 Strong transcription Psoas Muscle Psoas
45 chr3:24185000-24186200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr3:24185000-24186600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
47 chr3:24185000-24193200 Weak transcription Fetal Lung lung
48 chr3:24185400-24186200 Weak transcription Skeletal Muscle Female skeletal muscle
49 chr3:24185400-24186600 Weak transcription Aorta Aorta
50 chr3:24185400-24186600 Weak transcription Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015