The 2.0 version of rSNPBase

Variant report

Variant rs72632820
Chromosome Location chr1:227499939-227499940
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:227462600-227500200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr1:227469200-227500200 Weak transcription Left Ventricle heart
3 chr1:227469200-227502600 Weak transcription HSMM muscle
4 chr1:227469600-227501800 Weak transcription Fetal Stomach stomach
5 chr1:227475000-227502000 Weak transcription Primary hematopoietic stem cells blood
6 chr1:227475200-227500200 Weak transcription Fetal Intestine Small intestine
7 chr1:227483600-227500200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr1:227483800-227500400 Weak transcription Right Atrium heart
9 chr1:227487000-227500200 Weak transcription HMEC breast
10 chr1:227487000-227501800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr1:227487000-227501800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
12 chr1:227487000-227502000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr1:227487600-227502400 Weak transcription Osteobl bone
14 chr1:227487800-227500200 Weak transcription Muscle Satellite Cultured Cells --
15 chr1:227487800-227500400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr1:227487800-227501400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr1:227488000-227501800 Weak transcription A549 lung
18 chr1:227490200-227503800 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr1:227491400-227501400 Weak transcription HUES48 Cell Line embryonic stem cell
20 chr1:227492600-227503400 Weak transcription Fetal Muscle Trunk muscle
21 chr1:227494200-227500200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
22 chr1:227494400-227500200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr1:227495000-227500200 Weak transcription Brain Substantia Nigra brain
24 chr1:227495000-227503400 Weak transcription Skeletal Muscle Female skeletal muscle
25 chr1:227496200-227500200 Weak transcription Pancreas Pancrea
26 chr1:227496200-227502000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
27 chr1:227496200-227504800 Weak transcription Gastric stomach
28 chr1:227496400-227501200 Enhancers HUVEC blood vessel
29 chr1:227496400-227501800 Weak transcription Rectal Mucosa Donor 29 rectum
30 chr1:227496400-227502000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
31 chr1:227496800-227501800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr1:227496800-227502000 Weak transcription Breast Myoepithelial Primary Cells Breast
33 chr1:227497000-227501600 Weak transcription NHDF-Ad bronchial
34 chr1:227497200-227501800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr1:227497200-227502600 Weak transcription Fetal Intestine Large intestine
36 chr1:227497600-227501000 Weak transcription Pancreatic Islets Pancreatic Islet
37 chr1:227497600-227501800 Weak transcription Cortex derived primary cultured neurospheres brain
38 chr1:227497600-227502000 Weak transcription Liver Liver
39 chr1:227497800-227500200 Weak transcription Ovary ovary
40 chr1:227497800-227501400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr1:227498000-227500400 Weak transcription Colon Smooth Muscle Colon
42 chr1:227498000-227501800 Weak transcription Duodenum Mucosa Duodenum
43 chr1:227498200-227500200 Weak transcription Skeletal Muscle Male skeletal muscle
44 chr1:227498200-227500400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr1:227498200-227501800 Weak transcription Brain Anterior Caudate brain
46 chr1:227498200-227501800 Weak transcription Fetal Lung lung
47 chr1:227498200-227502000 Weak transcription ES-WA7 Cell Line embryonic stem cell
48 chr1:227498200-227503000 Weak transcription Brain Germinal Matrix brain
49 chr1:227498200-227503200 Weak transcription H9 Cell Line embryonic stem cell
50 chr1:227498400-227500200 Weak transcription NHEK skin

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Last update: Aug 31, 2015