The 2.0 version of rSNPBase

Variant report

Variant rs72632824
Chromosome Location chr1:227507936-227507937
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:227506800-227510000 Weak transcription Hela-S3 cervix
2 chr1:227507000-227510200 Weak transcription Gastric stomach
3 chr1:227507000-227515800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr1:227507200-227508200 Weak transcription Primary hematopoietic stem cells short term culture blood
5 chr1:227507200-227508200 Weak transcription Fetal Intestine Small intestine
6 chr1:227507200-227508400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr1:227507200-227508400 Weak transcription Colonic Mucosa Colon
8 chr1:227507200-227508400 Enhancers Fetal Intestine Large intestine
9 chr1:227507200-227508400 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr1:227507200-227508400 Enhancers Stomach Mucosa stomach
11 chr1:227507200-227508600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr1:227507200-227509000 Enhancers Brain Inferior Temporal Lobe brain
13 chr1:227507200-227509200 Enhancers Brain Anterior Caudate brain
14 chr1:227507200-227509400 Enhancers Brain Cingulate Gyrus brain
15 chr1:227507200-227509800 Enhancers Duodenum Mucosa Duodenum
16 chr1:227507200-227510000 Weak transcription Esophagus oesophagus
17 chr1:227507200-227510000 Weak transcription Pancreas Pancrea
18 chr1:227507200-227510200 Enhancers Liver Liver
19 chr1:227507200-227511000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr1:227507200-227518200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
21 chr1:227507400-227508000 Enhancers Pancreatic Islets Pancreatic Islet
22 chr1:227507400-227508200 Enhancers iPS-15b Cell Line embryonic stem cell
23 chr1:227507400-227508200 Enhancers Fetal Brain Male brain
24 chr1:227507400-227508400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr1:227507400-227508400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr1:227507400-227508400 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr1:227507400-227508600 Weak transcription Fetal Lung lung
28 chr1:227507400-227508800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
29 chr1:227507400-227508800 Enhancers HUES64 Cell Line embryonic stem cell
30 chr1:227507400-227509000 Enhancers Brain Hippocampus Middle brain
31 chr1:227507400-227509200 Enhancers Cortex derived primary cultured neurospheres brain
32 chr1:227507400-227509200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
33 chr1:227507400-227510200 Weak transcription HUES6 Cell Line embryonic stem cell
34 chr1:227507400-227510800 Weak transcription NHEK skin
35 chr1:227507600-227508200 Enhancers HUES48 Cell Line embryonic stem cell
36 chr1:227507600-227508200 Enhancers Fetal Kidney kidney
37 chr1:227507600-227508400 Weak transcription iPS-20b Cell Line embryonic stem cell
38 chr1:227507600-227508600 Weak transcription Brain Angular Gyrus brain
39 chr1:227507600-227509000 Enhancers iPS-18 Cell Line embryonic stem cell
40 chr1:227507600-227510400 Weak transcription K562 blood
41 chr1:227507800-227508200 Weak transcription ES-I3 Cell Line embryonic stem cell
42 chr1:227507800-227508400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain

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Last update: Aug 31, 2015