The 2.0 version of rSNPBase

Variant report

Variant rs16847643
Chromosome Location chr1:227501515-227501516
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:227469200-227502600 Weak transcription HSMM muscle
2 chr1:227469600-227501800 Weak transcription Fetal Stomach stomach
3 chr1:227475000-227502000 Weak transcription Primary hematopoietic stem cells blood
4 chr1:227487000-227501800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
5 chr1:227487000-227501800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
6 chr1:227487000-227502000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr1:227487600-227502400 Weak transcription Osteobl bone
8 chr1:227488000-227501800 Weak transcription A549 lung
9 chr1:227490200-227503800 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr1:227492600-227503400 Weak transcription Fetal Muscle Trunk muscle
11 chr1:227495000-227503400 Weak transcription Skeletal Muscle Female skeletal muscle
12 chr1:227496200-227502000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr1:227496200-227504800 Weak transcription Gastric stomach
14 chr1:227496400-227501800 Weak transcription Rectal Mucosa Donor 29 rectum
15 chr1:227496400-227502000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr1:227496800-227501800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr1:227496800-227502000 Weak transcription Breast Myoepithelial Primary Cells Breast
18 chr1:227497000-227501600 Weak transcription NHDF-Ad bronchial
19 chr1:227497200-227501800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr1:227497200-227502600 Weak transcription Fetal Intestine Large intestine
21 chr1:227497600-227501800 Weak transcription Cortex derived primary cultured neurospheres brain
22 chr1:227497600-227502000 Weak transcription Liver Liver
23 chr1:227498000-227501800 Weak transcription Duodenum Mucosa Duodenum
24 chr1:227498200-227501800 Weak transcription Brain Anterior Caudate brain
25 chr1:227498200-227501800 Weak transcription Fetal Lung lung
26 chr1:227498200-227502000 Weak transcription ES-WA7 Cell Line embryonic stem cell
27 chr1:227498200-227503000 Weak transcription Brain Germinal Matrix brain
28 chr1:227498200-227503200 Weak transcription H9 Cell Line embryonic stem cell
29 chr1:227498400-227501800 Weak transcription Adipose Nuclei Adipose
30 chr1:227498400-227502000 Weak transcription HepG2 liver
31 chr1:227498800-227501800 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr1:227499200-227502400 Weak transcription H1 Cell Line embryonic stem cell
33 chr1:227499400-227503800 Weak transcription Placenta Amnion Placenta Amnion
34 chr1:227499600-227502000 Enhancers HUES64 Cell Line embryonic stem cell
35 chr1:227500000-227502200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr1:227500200-227501600 Enhancers NHEK skin
37 chr1:227500400-227501600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr1:227500400-227501800 Enhancers Fetal Brain Female brain
39 chr1:227500600-227501600 Weak transcription Muscle Satellite Cultured Cells --
40 chr1:227500600-227501800 Weak transcription HMEC breast
41 chr1:227500600-227502000 Weak transcription ES-I3 Cell Line embryonic stem cell
42 chr1:227500600-227502000 Weak transcription Fetal Brain Male brain
43 chr1:227500600-227502000 Weak transcription Skeletal Muscle Male skeletal muscle
44 chr1:227500600-227502200 Enhancers iPS-20b Cell Line embryonic stem cell
45 chr1:227500600-227503200 Weak transcription Fetal Adrenal Gland Adrenal Gland
46 chr1:227500600-227503200 Weak transcription Placenta Placenta
47 chr1:227500600-227503200 Weak transcription Right Ventricle heart
48 chr1:227500600-227503400 Weak transcription Ovary ovary
49 chr1:227500600-227503600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
50 chr1:227500600-227504800 Weak transcription Lung lung

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Last update: Aug 31, 2015