The 2.0 version of rSNPBase

Variant report

Variant rs35903393
Chromosome Location chr1:227432195-227432196
allele -/G
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:227386200-227433400 Weak transcription Fetal Stomach stomach
2 chr1:227407200-227432400 Weak transcription Right Ventricle heart
3 chr1:227414000-227433200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
4 chr1:227414000-227459200 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr1:227414200-227433400 Weak transcription Fetal Adrenal Gland Adrenal Gland
6 chr1:227414200-227453800 Weak transcription HSMM muscle
7 chr1:227414400-227432400 Weak transcription iPS-20b Cell Line embryonic stem cell
8 chr1:227414400-227432600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr1:227415800-227456800 Weak transcription Cortex derived primary cultured neurospheres brain
10 chr1:227420800-227434600 Weak transcription Spleen Spleen
11 chr1:227423000-227432400 Weak transcription Small Intestine intestine
12 chr1:227424800-227432600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr1:227424800-227440800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr1:227425200-227432400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr1:227425400-227445200 Weak transcription Osteobl bone
16 chr1:227426000-227432400 Weak transcription Left Ventricle heart
17 chr1:227427000-227432400 Weak transcription Brain Angular Gyrus brain
18 chr1:227427200-227433200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr1:227427600-227432200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr1:227428400-227432600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
21 chr1:227429000-227432600 Weak transcription H9 Cell Line embryonic stem cell
22 chr1:227430400-227432600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
23 chr1:227430600-227432800 Enhancers K562 blood
24 chr1:227430600-227433000 Enhancers Skeletal Muscle Female skeletal muscle
25 chr1:227430600-227433400 Enhancers Brain Inferior Temporal Lobe brain
26 chr1:227430600-227434000 Enhancers Brain Anterior Caudate brain
27 chr1:227430600-227434000 Enhancers Pancreas Pancrea
28 chr1:227430600-227434600 Enhancers Fetal Heart heart
29 chr1:227430800-227432400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr1:227430800-227432600 Enhancers Colon Smooth Muscle Colon
31 chr1:227430800-227433000 Enhancers ES-I3 Cell Line embryonic stem cell
32 chr1:227430800-227433000 Enhancers HUVEC blood vessel
33 chr1:227430800-227433200 Enhancers Ovary ovary
34 chr1:227430800-227434200 Enhancers Gastric stomach
35 chr1:227431000-227432400 Weak transcription Breast Myoepithelial Primary Cells Breast
36 chr1:227431000-227433600 Enhancers Stomach Smooth Muscle stomach
37 chr1:227431200-227432200 Weak transcription Stomach Mucosa stomach
38 chr1:227431200-227432600 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr1:227431200-227432600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr1:227431200-227432800 Enhancers Fetal Kidney kidney
41 chr1:227431400-227432200 Enhancers Skeletal Muscle Male skeletal muscle
42 chr1:227431400-227433000 Enhancers Psoas Muscle Psoas
43 chr1:227431400-227434000 Enhancers Brain Hippocampus Middle brain
44 chr1:227431400-227434200 Enhancers Brain Cingulate Gyrus brain
45 chr1:227431600-227432400 Weak transcription ES-WA7 Cell Line embryonic stem cell
46 chr1:227431600-227432400 Weak transcription HUES6 Cell Line embryonic stem cell
47 chr1:227431600-227432400 Weak transcription HUES64 Cell Line embryonic stem cell
48 chr1:227431600-227432400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr1:227431600-227432600 Weak transcription Aorta Aorta
50 chr1:227431600-227432600 Weak transcription NHEK skin

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Last update: Aug 31, 2015