The 2.0 version of rSNPBase

Variant report

Variant rs2718218
Chromosome Location chr1:227415073-227415074
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:36 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:227380200-227421800 Weak transcription Ovary ovary
2 chr1:227383600-227421800 Weak transcription Stomach Smooth Muscle stomach
3 chr1:227386200-227433400 Weak transcription Fetal Stomach stomach
4 chr1:227399400-227415400 Weak transcription Cortex derived primary cultured neurospheres brain
5 chr1:227400400-227426800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr1:227402400-227430600 Weak transcription Pancreas Pancrea
7 chr1:227405600-227421800 Weak transcription Gastric stomach
8 chr1:227406400-227417200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr1:227407200-227432400 Weak transcription Right Ventricle heart
10 chr1:227408400-227415200 Weak transcription Fetal Kidney kidney
11 chr1:227411800-227430600 Weak transcription Right Atrium heart
12 chr1:227411800-227431400 Weak transcription Fetal Intestine Small intestine
13 chr1:227414000-227421800 Weak transcription Left Ventricle heart
14 chr1:227414000-227424400 Weak transcription Psoas Muscle Psoas
15 chr1:227414000-227433200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr1:227414000-227459200 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr1:227414200-227415200 Weak transcription Brain Hippocampus Middle brain
18 chr1:227414200-227415600 Enhancers HUVEC blood vessel
19 chr1:227414200-227416000 Weak transcription Pancreatic Islets Pancreatic Islet
20 chr1:227414200-227423400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
21 chr1:227414200-227424200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr1:227414200-227424400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr1:227414200-227426800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr1:227414200-227433400 Weak transcription Fetal Adrenal Gland Adrenal Gland
25 chr1:227414200-227453800 Weak transcription HSMM muscle
26 chr1:227414400-227415200 Weak transcription Brain Anterior Caudate brain
27 chr1:227414400-227415400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr1:227414400-227422200 Weak transcription Brain Cingulate Gyrus brain
29 chr1:227414400-227422400 Weak transcription Brain Inferior Temporal Lobe brain
30 chr1:227414400-227422400 Weak transcription K562 blood
31 chr1:227414400-227423000 Weak transcription HUES48 Cell Line embryonic stem cell
32 chr1:227414400-227423000 Weak transcription Brain Substantia Nigra brain
33 chr1:227414400-227423600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr1:227414400-227432400 Weak transcription iPS-20b Cell Line embryonic stem cell
35 chr1:227414400-227432600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr1:227415000-227416200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015