The 2.0 version of rSNPBase

Variant report

Variant rs7365134
Chromosome Location chr1:227329226-227329227
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:227259400-227349000 Weak transcription Colonic Mucosa Colon
2 chr1:227272800-227331000 Weak transcription Lung lung
3 chr1:227287400-227360800 Weak transcription Psoas Muscle Psoas
4 chr1:227288200-227332400 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr1:227288400-227343000 Weak transcription Rectal Smooth Muscle rectum
6 chr1:227288400-227398000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr1:227288600-227332400 Weak transcription NHLF lung
8 chr1:227288600-227333600 Weak transcription Esophagus oesophagus
9 chr1:227288800-227330000 Weak transcription NHDF-Ad bronchial
10 chr1:227295200-227346400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr1:227298600-227351800 Weak transcription Hela-S3 cervix
12 chr1:227299800-227332600 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr1:227300000-227333800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
14 chr1:227300000-227379800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr1:227300200-227334400 Weak transcription Stomach Mucosa stomach
16 chr1:227311000-227329400 Weak transcription Fetal Intestine Small intestine
17 chr1:227314200-227329400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr1:227316600-227352200 Weak transcription Gastric stomach
19 chr1:227316800-227331000 Weak transcription HSMMtube muscle
20 chr1:227317000-227374200 Weak transcription HepG2 liver
21 chr1:227317200-227331000 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr1:227317600-227331000 Weak transcription NHEK skin
23 chr1:227319600-227332400 Weak transcription Brain Angular Gyrus brain
24 chr1:227319800-227330600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr1:227323200-227342600 Weak transcription Colon Smooth Muscle Colon
26 chr1:227323200-227346400 Weak transcription Brain Substantia Nigra brain
27 chr1:227323400-227330600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr1:227324200-227348400 Weak transcription Placenta Amnion Placenta Amnion
29 chr1:227325200-227333800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr1:227325400-227333400 Strong transcription Adipose Nuclei Adipose
31 chr1:227325400-227334400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr1:227325400-227334800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr1:227325400-227335200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
34 chr1:227325600-227333600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr1:227325600-227333600 Strong transcription Rectal Mucosa Donor 31 rectum
36 chr1:227326000-227329600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr1:227326000-227330200 Strong transcription Breast Myoepithelial Primary Cells Breast
38 chr1:227326200-227329800 Strong transcription HMEC breast
39 chr1:227326200-227331600 Strong transcription Fetal Adrenal Gland Adrenal Gland
40 chr1:227326200-227333600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr1:227326200-227333800 Strong transcription Liver Liver
42 chr1:227326400-227333400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr1:227326600-227333400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr1:227326600-227334600 Strong transcription HUVEC blood vessel
45 chr1:227326600-227355200 Weak transcription Small Intestine intestine
46 chr1:227326800-227331000 Weak transcription Brain Cingulate Gyrus brain
47 chr1:227327000-227330600 Weak transcription Muscle Satellite Cultured Cells --
48 chr1:227327000-227331000 Weak transcription Fetal Muscle Trunk muscle
49 chr1:227327000-227334600 Weak transcription H9 Cell Line embryonic stem cell
50 chr1:227327000-227346200 Weak transcription NH-A brain

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Last update: Aug 31, 2015