The 2.0 version of rSNPBase

Variant report

Variant rs484150
Chromosome Location chr1:227317593-227317594
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:227214800-227329200 Weak transcription Right Ventricle heart
2 chr1:227259400-227349000 Weak transcription Colonic Mucosa Colon
3 chr1:227272800-227331000 Weak transcription Lung lung
4 chr1:227282600-227318000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr1:227286400-227328200 Weak transcription Brain Germinal Matrix brain
6 chr1:227287400-227360800 Weak transcription Psoas Muscle Psoas
7 chr1:227288000-227326400 Weak transcription A549 lung
8 chr1:227288200-227332400 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr1:227288400-227343000 Weak transcription Rectal Smooth Muscle rectum
10 chr1:227288400-227398000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr1:227288600-227328200 Weak transcription Fetal Stomach stomach
12 chr1:227288600-227332400 Weak transcription NHLF lung
13 chr1:227288600-227333600 Weak transcription Esophagus oesophagus
14 chr1:227288800-227330000 Weak transcription NHDF-Ad bronchial
15 chr1:227295200-227346400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr1:227296400-227326200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr1:227296600-227326200 Weak transcription Fetal Lung lung
18 chr1:227298600-227351800 Weak transcription Hela-S3 cervix
19 chr1:227299200-227318800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
20 chr1:227299800-227319600 Weak transcription Fetal Intestine Large intestine
21 chr1:227299800-227332600 Weak transcription Skeletal Muscle Male skeletal muscle
22 chr1:227300000-227321800 Weak transcription Colon Smooth Muscle Colon
23 chr1:227300000-227325800 Weak transcription Rectal Mucosa Donor 29 rectum
24 chr1:227300000-227326400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
25 chr1:227300000-227328600 Weak transcription Fetal Brain Female brain
26 chr1:227300000-227329200 Weak transcription Aorta Aorta
27 chr1:227300000-227333800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr1:227300000-227379800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr1:227300200-227322000 Weak transcription Muscle Satellite Cultured Cells --
30 chr1:227300200-227322600 Weak transcription Ovary ovary
31 chr1:227300200-227326200 Weak transcription Liver Liver
32 chr1:227300200-227326400 Weak transcription Stomach Smooth Muscle stomach
33 chr1:227300200-227334400 Weak transcription Stomach Mucosa stomach
34 chr1:227300600-227326600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr1:227307000-227326400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr1:227311000-227329200 Weak transcription Pancreas Pancrea
37 chr1:227311000-227329400 Weak transcription Fetal Intestine Small intestine
38 chr1:227313000-227322000 Weak transcription HUES48 Cell Line embryonic stem cell
39 chr1:227313000-227326400 Weak transcription H9 Cell Line embryonic stem cell
40 chr1:227313600-227325600 Weak transcription Primary hematopoietic stem cells blood
41 chr1:227314000-227326800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
42 chr1:227314000-227327800 Weak transcription ES-I3 Cell Line embryonic stem cell
43 chr1:227314200-227321800 Weak transcription Brain Anterior Caudate brain
44 chr1:227314200-227326200 Weak transcription H1 Cell Line embryonic stem cell
45 chr1:227314200-227326400 Weak transcription Brain Inferior Temporal Lobe brain
46 chr1:227314200-227327800 Weak transcription HUES6 Cell Line embryonic stem cell
47 chr1:227314200-227327800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
48 chr1:227314200-227329400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
49 chr1:227314400-227321800 Weak transcription iPS-20b Cell Line embryonic stem cell
50 chr1:227314600-227322600 Weak transcription Brain Substantia Nigra brain

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Last update: Aug 31, 2015