The 2.0 version of rSNPBase

Variant report

Variant rs9426540
Chromosome Location chr1:227285815-227285816
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:227154400-227294200 Weak transcription Hela-S3 cervix
2 chr1:227209200-227301600 Weak transcription Placenta Amnion Placenta Amnion
3 chr1:227214800-227329200 Weak transcription Right Ventricle heart
4 chr1:227216800-227287600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr1:227220600-227288000 Weak transcription Colon Smooth Muscle Colon
6 chr1:227236000-227286200 Weak transcription Fetal Brain Male brain
7 chr1:227240000-227286800 Weak transcription Brain Cingulate Gyrus brain
8 chr1:227247400-227299800 Weak transcription HMEC breast
9 chr1:227251000-227300000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr1:227257600-227288000 Weak transcription HSMMtube muscle
11 chr1:227257800-227312200 Weak transcription HUES6 Cell Line embryonic stem cell
12 chr1:227259400-227349000 Weak transcription Colonic Mucosa Colon
13 chr1:227260400-227287800 Weak transcription NHEK skin
14 chr1:227261400-227287800 Weak transcription Osteobl bone
15 chr1:227268800-227287000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr1:227271800-227286600 Weak transcription Duodenum Smooth Muscle Duodenum
17 chr1:227271800-227286800 Weak transcription NHDF-Ad bronchial
18 chr1:227271800-227287800 Weak transcription Rectal Smooth Muscle rectum
19 chr1:227271800-227288000 Weak transcription H1 Cell Line embryonic stem cell
20 chr1:227271800-227299600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr1:227272600-227286400 Weak transcription HUES64 Cell Line embryonic stem cell
22 chr1:227272600-227294400 Weak transcription Fetal Heart heart
23 chr1:227272800-227295000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr1:227272800-227295000 Weak transcription Primary hematopoietic stem cells blood
25 chr1:227272800-227331000 Weak transcription Lung lung
26 chr1:227273000-227286400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
27 chr1:227273000-227312400 Weak transcription ES-I3 Cell Line embryonic stem cell
28 chr1:227275400-227287000 Weak transcription iPS-18 Cell Line embryonic stem cell
29 chr1:227275800-227302600 Weak transcription ES-WA7 Cell Line embryonic stem cell
30 chr1:227277000-227288600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr1:227277200-227286400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr1:227277200-227302600 Weak transcription Brain Substantia Nigra brain
33 chr1:227279200-227286000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr1:227279200-227286000 Weak transcription Adipose Nuclei Adipose
35 chr1:227279200-227286200 Weak transcription Stomach Smooth Muscle stomach
36 chr1:227279200-227286400 Weak transcription Ovary ovary
37 chr1:227279200-227286600 Weak transcription HUES48 Cell Line embryonic stem cell
38 chr1:227279200-227286600 Weak transcription Fetal Lung lung
39 chr1:227279200-227287000 Weak transcription Skeletal Muscle Male skeletal muscle
40 chr1:227279200-227287800 Weak transcription Aorta Aorta
41 chr1:227279200-227287800 Weak transcription Brain Anterior Caudate brain
42 chr1:227279200-227287800 Weak transcription Fetal Stomach stomach
43 chr1:227279400-227286600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr1:227279400-227286800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
45 chr1:227279400-227288000 Weak transcription NH-A brain
46 chr1:227279800-227286000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
47 chr1:227279800-227286200 Weak transcription HUVEC blood vessel
48 chr1:227279800-227286400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr1:227279800-227287200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
50 chr1:227279800-227299000 Weak transcription Placenta Placenta

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Last update: Aug 31, 2015