The 2.0 version of rSNPBase

Variant report

Variant rs597007
Chromosome Location chr1:227310126-227310127
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:227214800-227329200 Weak transcription Right Ventricle heart
2 chr1:227257800-227312200 Weak transcription HUES6 Cell Line embryonic stem cell
3 chr1:227259400-227349000 Weak transcription Colonic Mucosa Colon
4 chr1:227272800-227331000 Weak transcription Lung lung
5 chr1:227273000-227312400 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr1:227282600-227318000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr1:227285600-227313800 Weak transcription Gastric stomach
8 chr1:227286400-227328200 Weak transcription Brain Germinal Matrix brain
9 chr1:227287400-227360800 Weak transcription Psoas Muscle Psoas
10 chr1:227288000-227326400 Weak transcription A549 lung
11 chr1:227288200-227332400 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr1:227288400-227343000 Weak transcription Rectal Smooth Muscle rectum
13 chr1:227288400-227398000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr1:227288600-227310800 Weak transcription Brain Inferior Temporal Lobe brain
15 chr1:227288600-227312200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr1:227288600-227313000 Weak transcription H1 Cell Line embryonic stem cell
17 chr1:227288600-227316000 Weak transcription Fetal Muscle Trunk muscle
18 chr1:227288600-227328200 Weak transcription Fetal Stomach stomach
19 chr1:227288600-227332400 Weak transcription NHLF lung
20 chr1:227288600-227333600 Weak transcription Esophagus oesophagus
21 chr1:227288800-227317200 Weak transcription NHEK skin
22 chr1:227288800-227330000 Weak transcription NHDF-Ad bronchial
23 chr1:227289000-227312000 Weak transcription iPS-20b Cell Line embryonic stem cell
24 chr1:227295200-227316000 Weak transcription Fetal Kidney kidney
25 chr1:227295200-227346400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr1:227295400-227310800 Weak transcription Brain Angular Gyrus brain
27 chr1:227295400-227313800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr1:227296000-227310600 Weak transcription Small Intestine intestine
29 chr1:227296400-227326200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr1:227296600-227316400 Weak transcription HSMMtube muscle
31 chr1:227296600-227326200 Weak transcription Fetal Lung lung
32 chr1:227298600-227351800 Weak transcription Hela-S3 cervix
33 chr1:227299200-227318800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr1:227299800-227313800 Weak transcription Fetal Adrenal Gland Adrenal Gland
35 chr1:227299800-227319600 Weak transcription Fetal Intestine Large intestine
36 chr1:227299800-227332600 Weak transcription Skeletal Muscle Male skeletal muscle
37 chr1:227300000-227310800 Weak transcription Brain Cingulate Gyrus brain
38 chr1:227300000-227310800 Weak transcription Brain Hippocampus Middle brain
39 chr1:227300000-227311800 Weak transcription HUES64 Cell Line embryonic stem cell
40 chr1:227300000-227312000 Weak transcription iPS-18 Cell Line embryonic stem cell
41 chr1:227300000-227312600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr1:227300000-227315800 Weak transcription Duodenum Smooth Muscle Duodenum
43 chr1:227300000-227316200 Weak transcription Rectal Mucosa Donor 31 rectum
44 chr1:227300000-227316400 Weak transcription Osteobl bone
45 chr1:227300000-227321800 Weak transcription Colon Smooth Muscle Colon
46 chr1:227300000-227325800 Weak transcription Rectal Mucosa Donor 29 rectum
47 chr1:227300000-227326400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
48 chr1:227300000-227328600 Weak transcription Fetal Brain Female brain
49 chr1:227300000-227329200 Weak transcription Aorta Aorta
50 chr1:227300000-227333800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015