The 2.0 version of rSNPBase

Variant report

Variant rs6695787
Chromosome Location chr1:227328743-227328744
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:227214800-227329200 Weak transcription Right Ventricle heart
2 chr1:227259400-227349000 Weak transcription Colonic Mucosa Colon
3 chr1:227272800-227331000 Weak transcription Lung lung
4 chr1:227287400-227360800 Weak transcription Psoas Muscle Psoas
5 chr1:227288200-227332400 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr1:227288400-227343000 Weak transcription Rectal Smooth Muscle rectum
7 chr1:227288400-227398000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr1:227288600-227332400 Weak transcription NHLF lung
9 chr1:227288600-227333600 Weak transcription Esophagus oesophagus
10 chr1:227288800-227330000 Weak transcription NHDF-Ad bronchial
11 chr1:227295200-227346400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr1:227298600-227351800 Weak transcription Hela-S3 cervix
13 chr1:227299800-227332600 Weak transcription Skeletal Muscle Male skeletal muscle
14 chr1:227300000-227329200 Weak transcription Aorta Aorta
15 chr1:227300000-227333800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr1:227300000-227379800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr1:227300200-227334400 Weak transcription Stomach Mucosa stomach
18 chr1:227311000-227329200 Weak transcription Pancreas Pancrea
19 chr1:227311000-227329400 Weak transcription Fetal Intestine Small intestine
20 chr1:227314200-227329400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
21 chr1:227316600-227352200 Weak transcription Gastric stomach
22 chr1:227316800-227329000 Weak transcription Placenta Placenta
23 chr1:227316800-227329200 Weak transcription Duodenum Mucosa Duodenum
24 chr1:227316800-227331000 Weak transcription HSMMtube muscle
25 chr1:227317000-227374200 Weak transcription HepG2 liver
26 chr1:227317200-227331000 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr1:227317600-227331000 Weak transcription NHEK skin
28 chr1:227318200-227329000 Weak transcription Fetal Kidney kidney
29 chr1:227319600-227332400 Weak transcription Brain Angular Gyrus brain
30 chr1:227319800-227330600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr1:227323200-227342600 Weak transcription Colon Smooth Muscle Colon
32 chr1:227323200-227346400 Weak transcription Brain Substantia Nigra brain
33 chr1:227323400-227330600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr1:227324200-227348400 Weak transcription Placenta Amnion Placenta Amnion
35 chr1:227325200-227333800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr1:227325400-227333400 Strong transcription Adipose Nuclei Adipose
37 chr1:227325400-227334400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr1:227325400-227334800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr1:227325400-227335200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr1:227325600-227333600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr1:227325600-227333600 Strong transcription Rectal Mucosa Donor 31 rectum
42 chr1:227326000-227329600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr1:227326000-227330200 Strong transcription Breast Myoepithelial Primary Cells Breast
44 chr1:227326200-227329800 Strong transcription HMEC breast
45 chr1:227326200-227331600 Strong transcription Fetal Adrenal Gland Adrenal Gland
46 chr1:227326200-227333600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr1:227326200-227333800 Strong transcription Liver Liver
48 chr1:227326400-227333400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr1:227326600-227329200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
50 chr1:227326600-227333400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015