The 2.0 version of rSNPBase

Variant report

Variant rs6703504
Chromosome Location chr1:227258228-227258229
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:227154400-227294200 Weak transcription Hela-S3 cervix
2 chr1:227178400-227271200 Weak transcription Psoas Muscle Psoas
3 chr1:227190600-227272600 Weak transcription Lung lung
4 chr1:227203000-227278800 Weak transcription Pancreas Pancrea
5 chr1:227209000-227272400 Weak transcription Fetal Intestine Small intestine
6 chr1:227209200-227301600 Weak transcription Placenta Amnion Placenta Amnion
7 chr1:227214800-227329200 Weak transcription Right Ventricle heart
8 chr1:227216800-227287600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr1:227217000-227264400 Weak transcription NHLF lung
10 chr1:227217000-227271400 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr1:227217000-227278800 Weak transcription Placenta Placenta
12 chr1:227220600-227272600 Weak transcription Aorta Aorta
13 chr1:227220600-227288000 Weak transcription Colon Smooth Muscle Colon
14 chr1:227226600-227270800 Weak transcription Fetal Brain Female brain
15 chr1:227226800-227260400 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr1:227226800-227272400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr1:227226800-227278400 Weak transcription Brain Inferior Temporal Lobe brain
18 chr1:227226800-227285600 Weak transcription Brain Germinal Matrix brain
19 chr1:227227000-227272200 Weak transcription Fetal Heart heart
20 chr1:227227000-227282200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
21 chr1:227227400-227259800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr1:227227400-227272400 Weak transcription Ovary ovary
23 chr1:227227400-227281200 Weak transcription Fetal Kidney kidney
24 chr1:227227400-227284200 Weak transcription Brain Angular Gyrus brain
25 chr1:227227600-227259200 Weak transcription Skeletal Muscle Female skeletal muscle
26 chr1:227228000-227277000 Weak transcription Rectal Mucosa Donor 31 rectum
27 chr1:227232800-227279200 Weak transcription Stomach Mucosa stomach
28 chr1:227235800-227271000 Weak transcription Fetal Muscle Leg muscle
29 chr1:227236000-227286200 Weak transcription Fetal Brain Male brain
30 chr1:227238400-227270600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
31 chr1:227238600-227278400 Weak transcription Brain Hippocampus Middle brain
32 chr1:227239800-227271200 Weak transcription Duodenum Smooth Muscle Duodenum
33 chr1:227239800-227271400 Weak transcription Fetal Intestine Large intestine
34 chr1:227240000-227286800 Weak transcription Brain Cingulate Gyrus brain
35 chr1:227240200-227266200 Weak transcription Cortex derived primary cultured neurospheres brain
36 chr1:227246400-227260600 Weak transcription Osteobl bone
37 chr1:227246400-227278400 Weak transcription NH-A brain
38 chr1:227247000-227260600 Weak transcription Muscle Satellite Cultured Cells --
39 chr1:227247000-227261400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr1:227247200-227259600 Weak transcription NHEK skin
41 chr1:227247400-227259600 Weak transcription K562 blood
42 chr1:227247400-227272400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr1:227247400-227299800 Weak transcription HMEC breast
44 chr1:227248400-227258400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr1:227248400-227258800 Weak transcription Breast Myoepithelial Primary Cells Breast
46 chr1:227248400-227268400 Weak transcription Fetal Lung lung
47 chr1:227248800-227271200 Weak transcription Fetal Muscle Trunk muscle
48 chr1:227249400-227270400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr1:227249800-227271200 Weak transcription Primary hematopoietic stem cells blood
50 chr1:227251000-227300000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell

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Last update: Aug 31, 2015