The 2.0 version of rSNPBase

Variant report

Variant rs2802274
Chromosome Location chr1:227176416-227176417
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:227147000-227177000 Weak transcription Primary T killer naive cells fromperipheralblood blood
2 chr1:227148600-227180800 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr1:227154400-227294200 Weak transcription Hela-S3 cervix
4 chr1:227154800-227176800 Weak transcription Primary T helper naive cells from peripheral blood blood
5 chr1:227158400-227183000 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr1:227160000-227177200 Weak transcription GM12878-XiMat blood
7 chr1:227160800-227181800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr1:227162400-227181600 Weak transcription NHEK skin
9 chr1:227162600-227176600 Strong transcription Thymus Thymus
10 chr1:227163000-227180000 Weak transcription HSMM muscle
11 chr1:227163400-227191200 Weak transcription iPS-15b Cell Line embryonic stem cell
12 chr1:227163800-227180400 Weak transcription Fetal Brain Male brain
13 chr1:227170400-227177600 Strong transcription Fetal Brain Female brain
14 chr1:227170600-227177600 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr1:227172600-227177600 Weak transcription Primary T killer memory cells from peripheral blood blood
16 chr1:227172800-227176600 Weak transcription HSMMtube muscle
17 chr1:227173200-227177400 Enhancers Brain Angular Gyrus brain
18 chr1:227173200-227178200 Weak transcription Fetal Kidney kidney
19 chr1:227173400-227176600 Strong transcription Fetal Adrenal Gland Adrenal Gland
20 chr1:227173400-227178200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
21 chr1:227173400-227178600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr1:227173400-227183400 Strong transcription Cortex derived primary cultured neurospheres brain
23 chr1:227173800-227176600 Strong transcription HUES6 Cell Line embryonic stem cell
24 chr1:227173800-227177200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
25 chr1:227173800-227177600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
26 chr1:227173800-227178400 Enhancers Brain Cingulate Gyrus brain
27 chr1:227174000-227178200 Enhancers Brain Substantia Nigra brain
28 chr1:227174800-227176600 Strong transcription HUVEC blood vessel
29 chr1:227174800-227176800 Weak transcription Primary T cells fromperipheralblood blood
30 chr1:227174800-227176800 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr1:227174800-227179400 Enhancers Stomach Mucosa stomach
32 chr1:227174800-227182000 Weak transcription NHDF-Ad bronchial
33 chr1:227175000-227176600 Weak transcription Right Atrium heart
34 chr1:227175000-227176800 Weak transcription Primary hematopoietic stem cells blood
35 chr1:227175000-227176800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
36 chr1:227175000-227177000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
37 chr1:227175000-227178400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
38 chr1:227175200-227176600 Weak transcription Primary monocytes fromperipheralblood blood
39 chr1:227175200-227176600 Weak transcription Primary B cells from peripheral blood blood
40 chr1:227175200-227176800 Weak transcription Primary T helper naive cells fromperipheralblood blood
41 chr1:227175200-227177000 Weak transcription Dnd41 blood
42 chr1:227175200-227177200 Weak transcription Fetal Heart heart
43 chr1:227175200-227181200 Strong transcription Fetal Muscle Leg muscle
44 chr1:227175200-227198400 Weak transcription A549 lung
45 chr1:227175200-227210200 Weak transcription HMEC breast
46 chr1:227175400-227177000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr1:227175400-227177200 Weak transcription Fetal Thymus thymus
48 chr1:227175400-227178000 Weak transcription Muscle Satellite Cultured Cells --
49 chr1:227175400-227178400 Enhancers Brain Hippocampus Middle brain
50 chr1:227175400-227178400 Enhancers Psoas Muscle Psoas

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015