The 2.0 version of rSNPBase

Variant report

Variant rs7517177
Chromosome Location chr1:227325528-227325529
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:227214800-227329200 Weak transcription Right Ventricle heart
2 chr1:227259400-227349000 Weak transcription Colonic Mucosa Colon
3 chr1:227272800-227331000 Weak transcription Lung lung
4 chr1:227286400-227328200 Weak transcription Brain Germinal Matrix brain
5 chr1:227287400-227360800 Weak transcription Psoas Muscle Psoas
6 chr1:227288000-227326400 Weak transcription A549 lung
7 chr1:227288200-227332400 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr1:227288400-227343000 Weak transcription Rectal Smooth Muscle rectum
9 chr1:227288400-227398000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr1:227288600-227328200 Weak transcription Fetal Stomach stomach
11 chr1:227288600-227332400 Weak transcription NHLF lung
12 chr1:227288600-227333600 Weak transcription Esophagus oesophagus
13 chr1:227288800-227330000 Weak transcription NHDF-Ad bronchial
14 chr1:227295200-227346400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr1:227296400-227326200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr1:227296600-227326200 Weak transcription Fetal Lung lung
17 chr1:227298600-227351800 Weak transcription Hela-S3 cervix
18 chr1:227299800-227332600 Weak transcription Skeletal Muscle Male skeletal muscle
19 chr1:227300000-227325800 Weak transcription Rectal Mucosa Donor 29 rectum
20 chr1:227300000-227326400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
21 chr1:227300000-227328600 Weak transcription Fetal Brain Female brain
22 chr1:227300000-227329200 Weak transcription Aorta Aorta
23 chr1:227300000-227333800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr1:227300000-227379800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr1:227300200-227326200 Weak transcription Liver Liver
26 chr1:227300200-227326400 Weak transcription Stomach Smooth Muscle stomach
27 chr1:227300200-227334400 Weak transcription Stomach Mucosa stomach
28 chr1:227300600-227326600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr1:227307000-227326400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr1:227311000-227329200 Weak transcription Pancreas Pancrea
31 chr1:227311000-227329400 Weak transcription Fetal Intestine Small intestine
32 chr1:227313000-227326400 Weak transcription H9 Cell Line embryonic stem cell
33 chr1:227313600-227325600 Weak transcription Primary hematopoietic stem cells blood
34 chr1:227314000-227326800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
35 chr1:227314000-227327800 Weak transcription ES-I3 Cell Line embryonic stem cell
36 chr1:227314200-227326200 Weak transcription H1 Cell Line embryonic stem cell
37 chr1:227314200-227326400 Weak transcription Brain Inferior Temporal Lobe brain
38 chr1:227314200-227327800 Weak transcription HUES6 Cell Line embryonic stem cell
39 chr1:227314200-227327800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
40 chr1:227314200-227329400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr1:227316000-227326200 Weak transcription Brain Cingulate Gyrus brain
42 chr1:227316200-227326600 Weak transcription NH-A brain
43 chr1:227316600-227325600 Weak transcription Rectal Mucosa Donor 31 rectum
44 chr1:227316600-227352200 Weak transcription Gastric stomach
45 chr1:227316800-227325600 Weak transcription iPS-18 Cell Line embryonic stem cell
46 chr1:227316800-227326000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr1:227316800-227326400 Weak transcription Brain Hippocampus Middle brain
48 chr1:227316800-227326400 Weak transcription Fetal Muscle Trunk muscle
49 chr1:227316800-227326600 Weak transcription Skeletal Muscle Female skeletal muscle
50 chr1:227316800-227328200 Weak transcription Left Ventricle heart

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Last update: Aug 31, 2015