Variant report

Variant rs4415529
Chromosome Location chr1:227486971-227486972
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:227462600-227500200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr1:227469200-227500200 Weak transcription Left Ventricle heart
3 chr1:227469200-227502600 Weak transcription HSMM muscle
4 chr1:227469600-227501800 Weak transcription Fetal Stomach stomach
5 chr1:227475000-227491800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr1:227475000-227502000 Weak transcription Primary hematopoietic stem cells blood
7 chr1:227475200-227500200 Weak transcription Fetal Intestine Small intestine
8 chr1:227478000-227491800 Weak transcription Psoas Muscle Psoas
9 chr1:227483600-227489800 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr1:227483600-227500200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr1:227483800-227500400 Weak transcription Right Atrium heart
12 chr1:227485600-227491200 Weak transcription HUES6 Cell Line embryonic stem cell
13 chr1:227485800-227487000 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr1:227485800-227488000 Enhancers Hela-S3 cervix
15 chr1:227486000-227487000 Enhancers Fetal Brain Female brain
16 chr1:227486000-227487200 Enhancers Brain Cingulate Gyrus brain
17 chr1:227486000-227487200 Enhancers Brain Hippocampus Middle brain
18 chr1:227486000-227488000 Enhancers Colon Smooth Muscle Colon
19 chr1:227486200-227487000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
20 chr1:227486200-227487200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr1:227486200-227487400 Enhancers Skeletal Muscle Male skeletal muscle
22 chr1:227486200-227487600 Enhancers Cortex derived primary cultured neurospheres brain
23 chr1:227486200-227487800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr1:227486200-227487800 Enhancers Liver Liver
25 chr1:227486200-227488600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr1:227486400-227487000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
27 chr1:227486400-227487000 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr1:227486400-227487000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr1:227486400-227487000 Enhancers Fetal Heart heart
30 chr1:227486400-227487000 Active TSS HSMMtube muscle
31 chr1:227486400-227487000 Flanking Active TSS NHDF-Ad bronchial
32 chr1:227486400-227487200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr1:227486400-227487200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr1:227486400-227488000 Enhancers HUES48 Cell Line embryonic stem cell
35 chr1:227486400-227488800 Enhancers Stomach Mucosa stomach
36 chr1:227486600-227487000 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
37 chr1:227486600-227487000 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr1:227486600-227487000 Active TSS Breast Myoepithelial Primary Cells Breast
39 chr1:227486600-227487000 Flanking Active TSS Muscle Satellite Cultured Cells --
40 chr1:227486600-227487000 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
41 chr1:227486600-227487000 Flanking Active TSS Adipose Nuclei Adipose
42 chr1:227486600-227487000 Weak transcription Brain Angular Gyrus brain
43 chr1:227486600-227487000 Flanking Active TSS Brain Anterior Caudate brain
44 chr1:227486600-227487000 Flanking Active TSS Pancreatic Islets Pancreatic Islet
45 chr1:227486600-227487000 Flanking Active TSS Fetal Lung lung
46 chr1:227486600-227487000 Active TSS Fetal Muscle Leg muscle
47 chr1:227486600-227487000 Flanking Active TSS HMEC breast
48 chr1:227486600-227487000 Flanking Active TSS NHEK skin
49 chr1:227486600-227487000 Flanking Active TSS Osteobl bone
50 chr1:227486600-227487600 Weak transcription Fetal Adrenal Gland Adrenal Gland

Quick Search:


  
Input of quick search could be:

what's new

Quick links