Variant report

Variant rs4233223
Chromosome Location chr1:227469477-227469478
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:227431600-227486200 Weak transcription NHDF-Ad bronchial
2 chr1:227443400-227474000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
3 chr1:227447200-227473600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr1:227449600-227473600 Weak transcription NH-A brain
5 chr1:227454200-227470400 Weak transcription Ovary ovary
6 chr1:227458800-227472200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr1:227462600-227473600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr1:227462600-227500200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr1:227463000-227473000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr1:227464400-227472800 Weak transcription H1 Cell Line embryonic stem cell
11 chr1:227464400-227472800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr1:227465400-227472200 Weak transcription ES-WA7 Cell Line embryonic stem cell
13 chr1:227466200-227473200 Weak transcription A549 lung
14 chr1:227466800-227472400 Weak transcription Fetal Intestine Large intestine
15 chr1:227467000-227472600 Weak transcription iPS-20b Cell Line embryonic stem cell
16 chr1:227467200-227485800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr1:227468000-227469600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr1:227468400-227471000 Weak transcription Pancreas Pancrea
19 chr1:227468600-227469600 ZNF genes & repeats ES-I3 Cell Line embryonic stem cell
20 chr1:227468600-227469600 Strong transcription Fetal Adrenal Gland Adrenal Gland
21 chr1:227468600-227469600 Enhancers Right Atrium heart
22 chr1:227468600-227469600 Enhancers Right Ventricle heart
23 chr1:227468600-227470200 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
24 chr1:227468600-227472600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
25 chr1:227468800-227469600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr1:227468800-227469600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr1:227468800-227469600 ZNF genes & repeats Fetal Muscle Leg muscle
28 chr1:227469000-227469600 Genic enhancers Aorta Aorta
29 chr1:227469000-227469600 ZNF genes & repeats Fetal Intestine Small intestine
30 chr1:227469000-227469600 Strong transcription Fetal Muscle Trunk muscle
31 chr1:227469000-227469600 ZNF genes & repeats Fetal Stomach stomach
32 chr1:227469000-227470000 Weak transcription K562 blood
33 chr1:227469000-227473000 Weak transcription Duodenum Mucosa Duodenum
34 chr1:227469200-227469600 Enhancers Esophagus oesophagus
35 chr1:227469200-227469600 Enhancers HMEC breast
36 chr1:227469200-227473200 Weak transcription HUVEC blood vessel
37 chr1:227469200-227473600 Weak transcription Breast Myoepithelial Primary Cells Breast
38 chr1:227469200-227477600 Weak transcription Psoas Muscle Psoas
39 chr1:227469200-227500200 Weak transcription Left Ventricle heart
40 chr1:227469200-227502600 Weak transcription HSMM muscle
41 chr1:227469400-227469600 Enhancers Brain Anterior Caudate brain
42 chr1:227469400-227469600 Enhancers Duodenum Smooth Muscle Duodenum
43 chr1:227469400-227469600 Enhancers Gastric stomach
44 chr1:227469400-227469600 Enhancers NHEK skin
45 chr1:227469400-227472200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr1:227469400-227472600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
47 chr1:227469400-227473200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
48 chr1:227469400-227477000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin

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