The 2.0 version of rSNPBase

Variant report

Variant rs2813952
Chromosome Location chr1:227426838-227426839
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:227386200-227433400 Weak transcription Fetal Stomach stomach
2 chr1:227402400-227430600 Weak transcription Pancreas Pancrea
3 chr1:227407200-227432400 Weak transcription Right Ventricle heart
4 chr1:227411800-227430600 Weak transcription Right Atrium heart
5 chr1:227411800-227431400 Weak transcription Fetal Intestine Small intestine
6 chr1:227414000-227433200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
7 chr1:227414000-227459200 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr1:227414200-227433400 Weak transcription Fetal Adrenal Gland Adrenal Gland
9 chr1:227414200-227453800 Weak transcription HSMM muscle
10 chr1:227414400-227432400 Weak transcription iPS-20b Cell Line embryonic stem cell
11 chr1:227414400-227432600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr1:227415800-227456800 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr1:227416200-227431800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
14 chr1:227420800-227434600 Weak transcription Spleen Spleen
15 chr1:227422000-227430800 Weak transcription Ovary ovary
16 chr1:227422600-227430800 Weak transcription Gastric stomach
17 chr1:227423000-227432400 Weak transcription Small Intestine intestine
18 chr1:227423200-227427400 Weak transcription A549 lung
19 chr1:227423600-227428800 Weak transcription Liver Liver
20 chr1:227423600-227430600 Weak transcription Brain Anterior Caudate brain
21 chr1:227423600-227430800 Weak transcription Colon Smooth Muscle Colon
22 chr1:227423600-227431400 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr1:227423600-227432000 Weak transcription Brain Substantia Nigra brain
24 chr1:227424000-227428200 Weak transcription HUES48 Cell Line embryonic stem cell
25 chr1:227424000-227428200 Weak transcription K562 blood
26 chr1:227424000-227430800 Weak transcription Breast Myoepithelial Primary Cells Breast
27 chr1:227424600-227430800 Weak transcription NHEK skin
28 chr1:227424800-227430600 Weak transcription Psoas Muscle Psoas
29 chr1:227424800-227430800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr1:227424800-227432600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr1:227424800-227440800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
32 chr1:227425200-227432400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr1:227425400-227430600 Weak transcription Muscle Satellite Cultured Cells --
34 chr1:227425400-227430800 Weak transcription HUVEC blood vessel
35 chr1:227425400-227445200 Weak transcription Osteobl bone
36 chr1:227426000-227432400 Weak transcription Left Ventricle heart
37 chr1:227426200-227427600 Enhancers Pancreatic Islets Pancreatic Islet
38 chr1:227426400-227427000 Enhancers Brain Angular Gyrus brain
39 chr1:227426400-227427200 Enhancers Brain Cingulate Gyrus brain
40 chr1:227426800-227427200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr1:227426800-227427200 Enhancers Adipose Nuclei Adipose
42 chr1:227426800-227427200 Enhancers Brain Hippocampus Middle brain
43 chr1:227426800-227427600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
44 chr1:227426800-227428400 Enhancers Brain Inferior Temporal Lobe brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015