The 2.0 version of rSNPBase

Variant report

Variant rs72632821
Chromosome Location chr1:227503567-227503568
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:96 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:227490200-227503800 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr1:227496200-227504800 Weak transcription Gastric stomach
3 chr1:227499400-227503800 Weak transcription Placenta Amnion Placenta Amnion
4 chr1:227500600-227503600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr1:227500600-227504800 Weak transcription Lung lung
6 chr1:227500800-227503600 Weak transcription Left Ventricle heart
7 chr1:227500800-227504600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr1:227500800-227504600 Weak transcription Pancreas Pancrea
9 chr1:227500800-227506600 Active TSS K562 blood
10 chr1:227501400-227506800 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr1:227501400-227507000 Active TSS HUES48 Cell Line embryonic stem cell
12 chr1:227501600-227507000 Active TSS Pancreatic Islets Pancreatic Islet
13 chr1:227501800-227505400 Active TSS Right Atrium heart
14 chr1:227501800-227505600 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr1:227501800-227505800 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
16 chr1:227501800-227506600 Active TSS Fetal Stomach stomach
17 chr1:227501800-227506600 Active TSS Rectal Mucosa Donor 29 rectum
18 chr1:227501800-227506600 Active TSS HMEC breast
19 chr1:227501800-227506600 Active TSS NHEK skin
20 chr1:227501800-227506800 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr1:227501800-227506800 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
22 chr1:227501800-227506800 Active TSS Brain Anterior Caudate brain
23 chr1:227501800-227506800 Active TSS A549 lung
24 chr1:227501800-227506800 Active TSS NHLF lung
25 chr1:227501800-227507000 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
26 chr1:227501800-227507000 Active TSS Brain Inferior Temporal Lobe brain
27 chr1:227501800-227507000 Active TSS Duodenum Smooth Muscle Duodenum
28 chr1:227501800-227507000 Active TSS Fetal Kidney kidney
29 chr1:227501800-227507200 Active TSS Duodenum Mucosa Duodenum
30 chr1:227501800-227507200 Active TSS NHDF-Ad bronchial
31 chr1:227502000-227503600 Flanking Active TSS HUES64 Cell Line embryonic stem cell
32 chr1:227502000-227503800 Active TSS Rectal Smooth Muscle rectum
33 chr1:227502000-227504600 Active TSS HepG2 liver
34 chr1:227502000-227506600 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
35 chr1:227502000-227506600 Active TSS Muscle Satellite Cultured Cells --
36 chr1:227502000-227506600 Active TSS Colonic Mucosa Colon
37 chr1:227502000-227506600 Active TSS Skeletal Muscle Male skeletal muscle
38 chr1:227502000-227506600 Active TSS HUVEC blood vessel
39 chr1:227502000-227506800 Active TSS Cortex derived primary cultured neurospheres brain
40 chr1:227502000-227506800 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr1:227502000-227506800 Active TSS Stomach Smooth Muscle stomach
42 chr1:227502000-227506800 Active TSS NH-A brain
43 chr1:227502000-227507000 Active TSS ES-I3 Cell Line embryonic stem cell
44 chr1:227502000-227507000 Active TSS ES-WA7 Cell Line embryonic stem cell
45 chr1:227502000-227507000 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr1:227502000-227507000 Active TSS HUES6 Cell Line embryonic stem cell
47 chr1:227502000-227507000 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
48 chr1:227502000-227507000 Active TSS Brain Angular Gyrus brain
49 chr1:227502000-227507000 Active TSS Brain Dorsolateral Prefrontal Cortex brain
50 chr1:227502000-227507000 Active TSS Brain Substantia Nigra brain

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Last update: Aug 31, 2015