The 2.0 version of rSNPBase

Variant report

Variant rs10495254
Chromosome Location chr1:227495853-227495854
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:227462600-227500200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr1:227469200-227500200 Weak transcription Left Ventricle heart
3 chr1:227469200-227502600 Weak transcription HSMM muscle
4 chr1:227469600-227501800 Weak transcription Fetal Stomach stomach
5 chr1:227475000-227502000 Weak transcription Primary hematopoietic stem cells blood
6 chr1:227475200-227500200 Weak transcription Fetal Intestine Small intestine
7 chr1:227483600-227500200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr1:227483800-227500400 Weak transcription Right Atrium heart
9 chr1:227486600-227497800 Weak transcription Brain Inferior Temporal Lobe brain
10 chr1:227487000-227496000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr1:227487000-227496200 Weak transcription Fetal Heart heart
12 chr1:227487000-227500200 Weak transcription HMEC breast
13 chr1:227487000-227501800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
14 chr1:227487000-227501800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr1:227487000-227502000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr1:227487600-227496800 Weak transcription Cortex derived primary cultured neurospheres brain
17 chr1:227487600-227497600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
18 chr1:227487600-227502400 Weak transcription Osteobl bone
19 chr1:227487800-227496000 Weak transcription Breast Myoepithelial Primary Cells Breast
20 chr1:227487800-227496000 Weak transcription Adipose Nuclei Adipose
21 chr1:227487800-227497000 Weak transcription Fetal Lung lung
22 chr1:227487800-227497200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr1:227487800-227500200 Weak transcription Muscle Satellite Cultured Cells --
24 chr1:227487800-227500400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr1:227487800-227501400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr1:227488000-227496400 Weak transcription Hela-S3 cervix
27 chr1:227488000-227501800 Weak transcription A549 lung
28 chr1:227488400-227496400 Weak transcription HUVEC blood vessel
29 chr1:227490200-227503800 Weak transcription Sigmoid Colon Sigmoid Colon
30 chr1:227490600-227496400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr1:227491400-227501400 Weak transcription HUES48 Cell Line embryonic stem cell
32 chr1:227491600-227499200 Weak transcription ES-I3 Cell Line embryonic stem cell
33 chr1:227491800-227497800 Weak transcription iPS-20b Cell Line embryonic stem cell
34 chr1:227492000-227496000 Weak transcription K562 blood
35 chr1:227492000-227497200 Weak transcription Brain Angular Gyrus brain
36 chr1:227492200-227498000 Weak transcription Psoas Muscle Psoas
37 chr1:227492600-227503400 Weak transcription Fetal Muscle Trunk muscle
38 chr1:227493200-227496400 Weak transcription NHDF-Ad bronchial
39 chr1:227493200-227499400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr1:227494200-227496000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr1:227494200-227496400 Weak transcription Brain Cingulate Gyrus brain
42 chr1:227494200-227498000 Weak transcription Small Intestine intestine
43 chr1:227494200-227500200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr1:227494400-227500200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
45 chr1:227494600-227496600 Weak transcription Skeletal Muscle Male skeletal muscle
46 chr1:227494600-227497400 Weak transcription Duodenum Mucosa Duodenum
47 chr1:227494800-227497800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr1:227495000-227496400 Weak transcription Colon Smooth Muscle Colon
49 chr1:227495000-227496600 Weak transcription Brain Anterior Caudate brain
50 chr1:227495000-227500200 Weak transcription Brain Substantia Nigra brain

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Last update: Aug 31, 2015