Variant report
| Variant | rs6426571 |
|---|---|
| Chromosome Location | chr1:227349151-227349152 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:227287400-227360800 | Weak transcription | Psoas Muscle | Psoas |
| 2 | chr1:227288400-227398000 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 3 | chr1:227298600-227351800 | Weak transcription | Hela-S3 | cervix |
| 4 | chr1:227300000-227379800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 5 | chr1:227316600-227352200 | Weak transcription | Gastric | stomach |
| 6 | chr1:227317000-227374200 | Weak transcription | HepG2 | liver |
| 7 | chr1:227326600-227355200 | Weak transcription | Small Intestine | intestine |
| 8 | chr1:227328000-227354400 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 9 | chr1:227328400-227350000 | Weak transcription | Fetal Brain Male | brain |
| 10 | chr1:227328600-227351600 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 11 | chr1:227328800-227354200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 12 | chr1:227329600-227358400 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 13 | chr1:227329600-227380000 | Weak transcription | Aorta | Aorta |
| 14 | chr1:227331600-227355000 | Weak transcription | Brain Anterior Caudate | brain |
| 15 | chr1:227331600-227358400 | Weak transcription | Brain Cingulate Gyrus | brain |
| 16 | chr1:227332800-227350000 | Weak transcription | HMEC | breast |
| 17 | chr1:227332800-227350200 | Weak transcription | Lung | lung |
| 18 | chr1:227332800-227354600 | Weak transcription | Ovary | ovary |
| 19 | chr1:227333000-227349400 | Weak transcription | Placenta | Placenta |
| 20 | chr1:227333200-227354800 | Weak transcription | Stomach Smooth Muscle | stomach |
| 21 | chr1:227333400-227354000 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 22 | chr1:227333400-227354400 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 23 | chr1:227333400-227358400 | Weak transcription | Osteobl | bone |
| 24 | chr1:227333400-227359000 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 25 | chr1:227333400-227381000 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 26 | chr1:227333400-227405600 | Weak transcription | Adipose Nuclei | Adipose |
| 27 | chr1:227334800-227371800 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 28 | chr1:227339600-227354000 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 29 | chr1:227343200-227350600 | Weak transcription | Stomach Mucosa | stomach |
| 30 | chr1:227343200-227352400 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 31 | chr1:227343200-227400400 | Weak transcription | A549 | lung |
| 32 | chr1:227343600-227358400 | Weak transcription | Colon Smooth Muscle | Colon |
| 33 | chr1:227346800-227349800 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 34 | chr1:227346800-227350000 | Weak transcription | Pancreas | Pancrea |
| 35 | chr1:227346800-227351200 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 36 | chr1:227346800-227354000 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 37 | chr1:227346800-227355000 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 38 | chr1:227346800-227357400 | Weak transcription | Brain Substantia Nigra | brain |
| 39 | chr1:227346800-227357800 | Weak transcription | NHDF-Ad | bronchial |
| 40 | chr1:227346800-227358000 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 41 | chr1:227346800-227358200 | Weak transcription | Right Ventricle | heart |
| 42 | chr1:227346800-227358400 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 43 | chr1:227346800-227366600 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 44 | chr1:227346800-227379800 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 45 | chr1:227346800-227403800 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 46 | chr1:227346800-227405800 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 47 | chr1:227346800-227406800 | Weak transcription | Fetal Kidney | kidney |
| 48 | chr1:227347200-227378000 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 49 | chr1:227347800-227354200 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 50 | chr1:227347800-227357400 | Weak transcription | Left Ventricle | heart |
