Variant report
| Variant | rs2203279 |
|---|---|
| Chromosome Location | chr1:227406809-227406810 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:227348200-227408400 | Weak transcription | Fetal Muscle Trunk | muscle |
| 2 | chr1:227348200-227412200 | Weak transcription | Fetal Muscle Leg | muscle |
| 3 | chr1:227370000-227413600 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 4 | chr1:227375600-227410800 | Weak transcription | HepG2 | liver |
| 5 | chr1:227376600-227412600 | Weak transcription | Fetal Lung | lung |
| 6 | chr1:227380200-227421800 | Weak transcription | Ovary | ovary |
| 7 | chr1:227382000-227414000 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 8 | chr1:227383600-227421800 | Weak transcription | Stomach Smooth Muscle | stomach |
| 9 | chr1:227386200-227433400 | Weak transcription | Fetal Stomach | stomach |
| 10 | chr1:227386400-227413800 | Weak transcription | Brain Anterior Caudate | brain |
| 11 | chr1:227387000-227413600 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 12 | chr1:227387400-227414000 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 13 | chr1:227390600-227413600 | Weak transcription | Small Intestine | intestine |
| 14 | chr1:227396800-227413600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 15 | chr1:227398200-227413600 | Weak transcription | NHLF | lung |
| 16 | chr1:227398600-227407000 | Weak transcription | Lung | lung |
| 17 | chr1:227398800-227407000 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 18 | chr1:227398800-227411200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 19 | chr1:227398800-227413800 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 20 | chr1:227399000-227408800 | Weak transcription | Liver | Liver |
| 21 | chr1:227399200-227407000 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 22 | chr1:227399400-227411200 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 23 | chr1:227399400-227415400 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 24 | chr1:227399600-227413200 | Weak transcription | HSMM | muscle |
| 25 | chr1:227399800-227407000 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 26 | chr1:227399800-227411000 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 27 | chr1:227400400-227407600 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 28 | chr1:227400400-227408200 | Weak transcription | K562 | blood |
| 29 | chr1:227400400-227410800 | Weak transcription | Brain Angular Gyrus | brain |
| 30 | chr1:227400400-227410800 | Weak transcription | Brain Substantia Nigra | brain |
| 31 | chr1:227400400-227413000 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 32 | chr1:227400400-227413000 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 33 | chr1:227400400-227426800 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 34 | chr1:227400600-227413000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 35 | chr1:227400600-227413000 | Weak transcription | NHEK | skin |
| 36 | chr1:227400800-227412800 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 37 | chr1:227401400-227407000 | Weak transcription | Brain Hippocampus Middle | brain |
| 38 | chr1:227401600-227413400 | Weak transcription | A549 | lung |
| 39 | chr1:227402400-227410800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 40 | chr1:227402400-227430600 | Weak transcription | Pancreas | Pancrea |
| 41 | chr1:227403000-227407200 | Weak transcription | Fetal Heart | heart |
| 42 | chr1:227403800-227412800 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 43 | chr1:227404000-227413800 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 44 | chr1:227404400-227412800 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 45 | chr1:227405600-227407000 | Weak transcription | Left Ventricle | heart |
| 46 | chr1:227405600-227407600 | Enhancers | Stomach Mucosa | stomach |
| 47 | chr1:227405600-227408200 | Weak transcription | Psoas Muscle | Psoas |
| 48 | chr1:227405600-227421800 | Weak transcription | Gastric | stomach |
| 49 | chr1:227406400-227417200 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 50 | chr1:227406600-227407000 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
