The 2.0 version of rSNPBase

Variant report

Variant rs16847612
Chromosome Location chr1:227495155-227495156
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:227462600-227500200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr1:227469200-227500200 Weak transcription Left Ventricle heart
3 chr1:227469200-227502600 Weak transcription HSMM muscle
4 chr1:227469600-227501800 Weak transcription Fetal Stomach stomach
5 chr1:227475000-227502000 Weak transcription Primary hematopoietic stem cells blood
6 chr1:227475200-227500200 Weak transcription Fetal Intestine Small intestine
7 chr1:227483600-227500200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr1:227483800-227500400 Weak transcription Right Atrium heart
9 chr1:227486600-227497800 Weak transcription Brain Inferior Temporal Lobe brain
10 chr1:227487000-227495800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
11 chr1:227487000-227496000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr1:227487000-227496200 Weak transcription Fetal Heart heart
13 chr1:227487000-227500200 Weak transcription HMEC breast
14 chr1:227487000-227501800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
15 chr1:227487000-227501800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
16 chr1:227487000-227502000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr1:227487600-227496800 Weak transcription Cortex derived primary cultured neurospheres brain
18 chr1:227487600-227497600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
19 chr1:227487600-227502400 Weak transcription Osteobl bone
20 chr1:227487800-227496000 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr1:227487800-227496000 Weak transcription Adipose Nuclei Adipose
22 chr1:227487800-227497000 Weak transcription Fetal Lung lung
23 chr1:227487800-227497200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr1:227487800-227500200 Weak transcription Muscle Satellite Cultured Cells --
25 chr1:227487800-227500400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr1:227487800-227501400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr1:227488000-227496400 Weak transcription Hela-S3 cervix
28 chr1:227488000-227501800 Weak transcription A549 lung
29 chr1:227488400-227496400 Weak transcription HUVEC blood vessel
30 chr1:227490200-227503800 Weak transcription Sigmoid Colon Sigmoid Colon
31 chr1:227490600-227496400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr1:227491400-227501400 Weak transcription HUES48 Cell Line embryonic stem cell
33 chr1:227491600-227499200 Weak transcription ES-I3 Cell Line embryonic stem cell
34 chr1:227491800-227497800 Weak transcription iPS-20b Cell Line embryonic stem cell
35 chr1:227492000-227496000 Weak transcription K562 blood
36 chr1:227492000-227497200 Weak transcription Brain Angular Gyrus brain
37 chr1:227492200-227498000 Weak transcription Psoas Muscle Psoas
38 chr1:227492600-227503400 Weak transcription Fetal Muscle Trunk muscle
39 chr1:227493200-227496400 Weak transcription NHDF-Ad bronchial
40 chr1:227493200-227499400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr1:227494000-227495200 Enhancers Brain Hippocampus Middle brain
42 chr1:227494200-227495600 Weak transcription Pancreatic Islets Pancreatic Islet
43 chr1:227494200-227496000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr1:227494200-227496400 Weak transcription Brain Cingulate Gyrus brain
45 chr1:227494200-227498000 Weak transcription Small Intestine intestine
46 chr1:227494200-227500200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr1:227494400-227495400 Enhancers Stomach Mucosa stomach
48 chr1:227494400-227500200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
49 chr1:227494600-227496600 Weak transcription Skeletal Muscle Male skeletal muscle
50 chr1:227494600-227497400 Weak transcription Duodenum Mucosa Duodenum

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Last update: Aug 31, 2015