Variant report
| Variant | rs2999725 |
|---|---|
| Chromosome Location | chr1:227321057-227321058 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:227214800-227329200 | Weak transcription | Right Ventricle | heart |
| 2 | chr1:227259400-227349000 | Weak transcription | Colonic Mucosa | Colon |
| 3 | chr1:227272800-227331000 | Weak transcription | Lung | lung |
| 4 | chr1:227286400-227328200 | Weak transcription | Brain Germinal Matrix | brain |
| 5 | chr1:227287400-227360800 | Weak transcription | Psoas Muscle | Psoas |
| 6 | chr1:227288000-227326400 | Weak transcription | A549 | lung |
| 7 | chr1:227288200-227332400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 8 | chr1:227288400-227343000 | Weak transcription | Rectal Smooth Muscle | rectum |
| 9 | chr1:227288400-227398000 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 10 | chr1:227288600-227328200 | Weak transcription | Fetal Stomach | stomach |
| 11 | chr1:227288600-227332400 | Weak transcription | NHLF | lung |
| 12 | chr1:227288600-227333600 | Weak transcription | Esophagus | oesophagus |
| 13 | chr1:227288800-227330000 | Weak transcription | NHDF-Ad | bronchial |
| 14 | chr1:227295200-227346400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 15 | chr1:227296400-227326200 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 16 | chr1:227296600-227326200 | Weak transcription | Fetal Lung | lung |
| 17 | chr1:227298600-227351800 | Weak transcription | Hela-S3 | cervix |
| 18 | chr1:227299800-227332600 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 19 | chr1:227300000-227321800 | Weak transcription | Colon Smooth Muscle | Colon |
| 20 | chr1:227300000-227325800 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 21 | chr1:227300000-227326400 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 22 | chr1:227300000-227328600 | Weak transcription | Fetal Brain Female | brain |
| 23 | chr1:227300000-227329200 | Weak transcription | Aorta | Aorta |
| 24 | chr1:227300000-227333800 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 25 | chr1:227300000-227379800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 26 | chr1:227300200-227322000 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 27 | chr1:227300200-227322600 | Weak transcription | Ovary | ovary |
| 28 | chr1:227300200-227326200 | Weak transcription | Liver | Liver |
| 29 | chr1:227300200-227326400 | Weak transcription | Stomach Smooth Muscle | stomach |
| 30 | chr1:227300200-227334400 | Weak transcription | Stomach Mucosa | stomach |
| 31 | chr1:227300600-227326600 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 32 | chr1:227307000-227326400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 33 | chr1:227311000-227329200 | Weak transcription | Pancreas | Pancrea |
| 34 | chr1:227311000-227329400 | Weak transcription | Fetal Intestine Small | intestine |
| 35 | chr1:227313000-227322000 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 36 | chr1:227313000-227326400 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 37 | chr1:227313600-227325600 | Weak transcription | Primary hematopoietic stem cells | blood |
| 38 | chr1:227314000-227326800 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 39 | chr1:227314000-227327800 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 40 | chr1:227314200-227321800 | Weak transcription | Brain Anterior Caudate | brain |
| 41 | chr1:227314200-227326200 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 42 | chr1:227314200-227326400 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 43 | chr1:227314200-227327800 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 44 | chr1:227314200-227327800 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 45 | chr1:227314200-227329400 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 46 | chr1:227314400-227321800 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 47 | chr1:227314600-227322600 | Weak transcription | Brain Substantia Nigra | brain |
| 48 | chr1:227316000-227322600 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 49 | chr1:227316000-227326200 | Weak transcription | Brain Cingulate Gyrus | brain |
| 50 | chr1:227316200-227326600 | Weak transcription | NH-A | brain |
