Variant report
Variant | rs72638311 |
---|---|
Chromosome Location | chr8:50758066-50758067 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10086004 | 0.96[EUR][1000 genomes] |
rs10089399 | 0.96[EUR][1000 genomes] |
rs10090657 | 0.96[EUR][1000 genomes] |
rs10092384 | 0.96[EUR][1000 genomes] |
rs1038534 | 0.80[EUR][1000 genomes] |
rs10504092 | 0.81[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs1074385 | 0.96[EUR][1000 genomes] |
rs11785147 | 0.96[EUR][1000 genomes] |
rs11989680 | 0.84[EUR][1000 genomes] |
rs11991730 | 0.84[EUR][1000 genomes] |
rs11992716 | 0.84[EUR][1000 genomes] |
rs11992755 | 0.83[EUR][1000 genomes] |
rs12542041 | 0.96[EUR][1000 genomes] |
rs13251355 | 0.96[EUR][1000 genomes] |
rs13267366 | 0.80[EUR][1000 genomes] |
rs1352112 | 0.96[EUR][1000 genomes] |
rs1352113 | 0.86[EUR][1000 genomes] |
rs1352117 | 0.80[EUR][1000 genomes] |
rs1385974 | 0.96[EUR][1000 genomes] |
rs1385975 | 0.96[EUR][1000 genomes] |
rs1385976 | 0.96[EUR][1000 genomes] |
rs1486241 | 0.96[EUR][1000 genomes] |
rs1486242 | 0.96[EUR][1000 genomes] |
rs1486243 | 0.96[EUR][1000 genomes] |
rs1486245 | 0.88[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs1486251 | 0.96[EUR][1000 genomes] |
rs1486252 | 0.96[EUR][1000 genomes] |
rs1552372 | 0.96[EUR][1000 genomes] |
rs1580468 | 0.96[EUR][1000 genomes] |
rs17674246 | 0.80[AFR][1000 genomes];0.83[EUR][1000 genomes] |
rs17674389 | 0.84[EUR][1000 genomes] |
rs17674783 | 0.88[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs17747294 | 0.88[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs17747567 | 0.88[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs17747896 | 0.81[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs17747929 | 0.81[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs182646 | 0.87[EUR][1000 genomes] |
rs1906013 | 0.83[EUR][1000 genomes] |
rs1906014 | 0.83[EUR][1000 genomes] |
rs1994344 | 0.80[EUR][1000 genomes] |
rs2129162 | 0.96[EUR][1000 genomes] |
rs2129165 | 0.96[EUR][1000 genomes] |
rs2200494 | 0.87[EUR][1000 genomes] |
rs223081 | 0.85[EUR][1000 genomes] |
rs2385544 | 0.85[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs2385545 | 0.96[EUR][1000 genomes] |
rs2385546 | 0.96[EUR][1000 genomes] |
rs2385547 | 0.96[EUR][1000 genomes] |
rs2385548 | 0.96[EUR][1000 genomes] |
rs2449957 | 0.85[EUR][1000 genomes] |
rs2449958 | 0.87[EUR][1000 genomes] |
rs2450285 | 0.85[EUR][1000 genomes] |
rs2450288 | 0.87[EUR][1000 genomes] |
rs2450291 | 0.87[EUR][1000 genomes] |
rs2628417 | 0.87[EUR][1000 genomes] |
rs318860 | 0.85[EUR][1000 genomes] |
rs318862 | 0.87[EUR][1000 genomes] |
rs318864 | 0.87[EUR][1000 genomes] |
rs318870 | 0.86[EUR][1000 genomes] |
rs318871 | 0.86[EUR][1000 genomes] |
rs318872 | 0.85[EUR][1000 genomes] |
rs318873 | 0.85[EUR][1000 genomes] |
rs318875 | 0.85[EUR][1000 genomes] |
rs35958802 | 0.86[AFR][1000 genomes];0.81[EUR][1000 genomes] |
rs365318 | 0.87[EUR][1000 genomes] |
rs366526 | 0.87[EUR][1000 genomes] |
rs380279 | 0.85[EUR][1000 genomes] |
rs384406 | 0.87[EUR][1000 genomes] |
rs391798 | 0.87[EUR][1000 genomes] |
rs402156 | 0.85[EUR][1000 genomes] |
rs406337 | 0.87[EUR][1000 genomes] |
rs415276 | 0.85[EUR][1000 genomes] |
rs4339657 | 0.80[EUR][1000 genomes] |
rs436688 | 0.83[AMR][1000 genomes];0.86[EUR][1000 genomes] |
rs4377975 | 0.81[AMR][1000 genomes];0.99[EUR][1000 genomes] |
rs4383988 | 0.96[EUR][1000 genomes] |
rs4584153 | 0.96[EUR][1000 genomes] |
rs55920504 | 0.99[EUR][1000 genomes] |
rs56076516 | 0.84[EUR][1000 genomes] |
rs57165932 | 0.90[AFR][1000 genomes];0.84[EUR][1000 genomes] |
rs57585353 | 0.88[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs58597929 | 0.99[EUR][1000 genomes] |
rs59405147 | 0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes] |
rs60061614 | 0.81[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs6472722 | 0.83[EUR][1000 genomes] |
rs7008924 | 0.96[EUR][1000 genomes] |
rs7013903 | 0.96[EUR][1000 genomes] |
rs72636668 | 0.81[EUR][1000 genomes] |
rs72636670 | 0.83[AFR][1000 genomes];0.81[EUR][1000 genomes] |
rs72636673 | 0.80[EUR][1000 genomes] |
rs72636675 | 0.81[EUR][1000 genomes] |
rs72636676 | 0.80[AFR][1000 genomes];0.81[EUR][1000 genomes] |
rs72636678 | 0.83[AFR][1000 genomes];0.81[EUR][1000 genomes] |
rs72636684 | 0.81[EUR][1000 genomes] |
rs72636691 | 0.84[EUR][1000 genomes] |
rs72636696 | 0.84[EUR][1000 genomes] |
rs72636698 | 0.84[EUR][1000 genomes] |
rs72636701 | 0.84[EUR][1000 genomes] |
rs72636702 | 0.84[EUR][1000 genomes] |
rs72638307 | 0.88[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs72638312 | 0.88[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs72638332 | 0.81[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs72638338 | 0.81[AMR][1000 genomes];0.99[EUR][1000 genomes] |
rs7825552 | 0.96[EUR][1000 genomes] |
rs9298228 | 0.96[EUR][1000 genomes] |
rs9298229 | 0.96[EUR][1000 genomes] |
rs964011 | 0.96[EUR][1000 genomes] |
rs967109 | 0.87[EUR][1000 genomes] |
rs967110 | 0.87[EUR][1000 genomes] |
rs967116 | 0.84[EUR][1000 genomes] |
rs986450 | 0.84[EUR][1000 genomes] |
rs9886451 | 0.96[EUR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | esv3353749 | chr8:50530807-51139242 | Enhancers Weak transcription Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 5 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr8:50756600-50758400 | Weak transcription | Fetal Intestine Small | intestine |
2 | chr8:50757200-50758400 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
3 | chr8:50757200-50758400 | Weak transcription | Fetal Intestine Large | intestine |