Variant report
Variant | rs1994344 |
---|---|
Chromosome Location | chr8:50751006-50751007 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10086004 | 0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs10089399 | 0.92[AFR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs10090657 | 0.97[AFR][1000 genomes];0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs10092384 | 0.91[AFR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs10107423 | 0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs10111730 | 0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1038534 | 0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs10504092 | 0.80[EUR][1000 genomes] |
rs1074385 | 0.83[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs10957620 | 0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs10957679 | 0.88[ASN][1000 genomes] |
rs10957682 | 0.88[ASN][1000 genomes] |
rs11782597 | 0.84[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs11785147 | 0.91[AFR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs11786939 | 1.00[ASN][1000 genomes] |
rs11787050 | 0.88[ASN][1000 genomes] |
rs11989680 | 0.96[EUR][1000 genomes] |
rs11991730 | 0.96[EUR][1000 genomes] |
rs11992716 | 0.96[EUR][1000 genomes] |
rs11992755 | 0.95[EUR][1000 genomes] |
rs12542041 | 0.95[AFR][1000 genomes];0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs12542687 | 0.85[ASN][1000 genomes] |
rs12545695 | 0.84[ASN][1000 genomes] |
rs12547245 | 0.97[ASN][1000 genomes] |
rs12550124 | 0.81[ASN][1000 genomes] |
rs12677051 | 0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs13251355 | 0.83[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs13255117 | 1.00[ASN][1000 genomes] |
rs13261298 | 1.00[ASN][1000 genomes] |
rs13267366 | 0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1352112 | 0.97[AFR][1000 genomes];0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1352113 | 0.95[AFR][1000 genomes];0.86[ASN][1000 genomes] |
rs1385974 | 0.97[AFR][1000 genomes];0.87[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1385975 | 0.95[AFR][1000 genomes];0.87[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1385976 | 0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes] |
rs1385980 | 0.85[ASN][1000 genomes] |
rs1385982 | 1.00[ASN][1000 genomes] |
rs1486241 | 0.84[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1486242 | 0.84[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1486243 | 0.97[AFR][1000 genomes];0.87[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1486245 | 0.80[EUR][1000 genomes] |
rs1486251 | 0.97[AFR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1486252 | 0.97[AFR][1000 genomes];0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1486253 | 0.84[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1486254 | 1.00[ASN][1000 genomes] |
rs1486263 | 0.82[ASN][1000 genomes] |
rs1552371 | 0.90[AFR][1000 genomes];0.86[ASN][1000 genomes] |
rs1552372 | 0.97[AFR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1552373 | 1.00[ASN][1000 genomes] |
rs1552375 | 0.98[ASN][1000 genomes] |
rs1552377 | 0.97[ASN][1000 genomes] |
rs1552378 | 0.84[ASN][1000 genomes] |
rs1552379 | 0.84[ASN][1000 genomes] |
rs1580468 | 0.83[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1586364 | 0.88[ASN][1000 genomes] |
rs1601569 | 1.00[ASN][1000 genomes] |
rs16912794 | 1.00[ASN][1000 genomes] |
rs16913087 | 1.00[ASN][1000 genomes] |
rs16913172 | 0.96[ASN][1000 genomes] |
rs16913461 | 1.00[ASN][1000 genomes] |
rs16913472 | 1.00[ASN][1000 genomes] |
rs16913475 | 1.00[ASN][1000 genomes] |
rs16913687 | 0.88[ASN][1000 genomes] |
rs16914039 | 0.82[ASN][1000 genomes] |
rs170331 | 0.82[ASN][1000 genomes] |
rs17674246 | 0.95[EUR][1000 genomes] |
rs17674389 | 0.96[EUR][1000 genomes] |
rs17674783 | 0.80[EUR][1000 genomes] |
rs17747294 | 0.80[EUR][1000 genomes] |
rs17747567 | 0.80[EUR][1000 genomes] |
rs17747896 | 0.80[EUR][1000 genomes] |
rs17747929 | 0.80[EUR][1000 genomes] |
rs1906013 | 0.95[EUR][1000 genomes] |
rs1906014 | 0.86[AFR][1000 genomes];0.84[ASN][1000 genomes] |
rs1906015 | 0.94[ASN][1000 genomes] |
rs1979535 | 0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1979536 | 0.84[AMR][1000 genomes];0.97[EUR][1000 genomes] |
rs2129162 | 0.83[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2129164 | 1.00[ASN][1000 genomes] |
rs2129165 | 0.83[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs2247368 | 0.84[ASN][1000 genomes] |
rs2385544 | 0.80[EUR][1000 genomes] |
rs2385545 | 0.95[AFR][1000 genomes];0.84[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2385546 | 0.83[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2385547 | 0.83[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2385548 | 0.83[EUR][1000 genomes];0.88[ASN][1000 genomes] |
rs2449960 | 0.84[ASN][1000 genomes] |
rs2450286 | 0.82[ASN][1000 genomes] |
rs2450287 | 0.81[ASN][1000 genomes] |
rs2450290 | 0.81[ASN][1000 genomes] |
rs28869911 | 0.82[ASN][1000 genomes] |
rs318850 | 0.84[ASN][1000 genomes] |
rs318858 | 0.82[ASN][1000 genomes] |
rs318859 | 0.82[ASN][1000 genomes] |
rs318861 | 0.82[ASN][1000 genomes] |
rs318874 | 0.82[ASN][1000 genomes] |
rs35958802 | 0.93[EUR][1000 genomes] |
rs4242455 | 0.81[ASN][1000 genomes] |
rs4339657 | 0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs4383988 | 0.97[AFR][1000 genomes];0.84[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs4389954 | 0.81[ASN][1000 genomes] |
rs4457345 | 0.81[ASN][1000 genomes] |
rs4584153 | 0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs4599827 | 0.80[EUR][1000 genomes] |
rs4873113 | 1.00[ASN][1000 genomes] |
rs4873114 | 1.00[ASN][1000 genomes] |
rs4873116 | 1.00[ASN][1000 genomes] |
rs4873118 | 0.88[ASN][1000 genomes] |
rs4873119 | 0.88[ASN][1000 genomes] |
rs4873376 | 0.81[ASN][1000 genomes] |
rs4873379 | 0.83[ASN][1000 genomes] |
rs4873382 | 0.98[ASN][1000 genomes] |
rs4873383 | 1.00[ASN][1000 genomes] |
rs4873388 | 1.00[ASN][1000 genomes] |
rs4873391 | 1.00[ASN][1000 genomes] |
rs4873392 | 0.88[ASN][1000 genomes] |
rs55636909 | 0.98[ASN][1000 genomes] |
rs55879210 | 0.88[ASN][1000 genomes] |
rs56076516 | 0.96[EUR][1000 genomes] |
rs56659775 | 1.00[ASN][1000 genomes] |
rs57165932 | 0.96[EUR][1000 genomes] |
rs57462717 | 1.00[ASN][1000 genomes] |
rs57585353 | 0.80[EUR][1000 genomes] |
rs58764084 | 1.00[ASN][1000 genomes] |
rs59379959 | 1.00[ASN][1000 genomes] |
rs59848488 | 1.00[ASN][1000 genomes] |
rs60061614 | 0.80[EUR][1000 genomes] |
rs60213702 | 1.00[ASN][1000 genomes] |
rs60311298 | 0.86[EUR][1000 genomes] |
rs60631955 | 1.00[ASN][1000 genomes] |
rs61662535 | 1.00[ASN][1000 genomes] |
rs6472721 | 1.00[ASN][1000 genomes] |
rs6472722 | 0.95[EUR][1000 genomes] |
rs6988440 | 0.85[ASN][1000 genomes] |
rs6994224 | 1.00[ASN][1000 genomes] |
rs7004973 | 0.82[ASN][1000 genomes] |
rs7008449 | 0.84[ASN][1000 genomes] |
rs7008924 | 0.97[AFR][1000 genomes];0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs7013903 | 0.84[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs72636668 | 0.93[EUR][1000 genomes] |
rs72636670 | 0.93[EUR][1000 genomes] |
rs72636673 | 0.92[EUR][1000 genomes] |
rs72636675 | 0.93[EUR][1000 genomes] |
rs72636676 | 0.93[EUR][1000 genomes] |
rs72636678 | 0.93[EUR][1000 genomes] |
rs72636684 | 0.93[EUR][1000 genomes] |
rs72636691 | 0.96[EUR][1000 genomes] |
rs72636696 | 0.96[EUR][1000 genomes] |
rs72636698 | 0.96[EUR][1000 genomes] |
rs72636701 | 0.96[EUR][1000 genomes] |
rs72636702 | 0.96[EUR][1000 genomes] |
rs72638307 | 0.80[EUR][1000 genomes] |
rs72638311 | 0.80[EUR][1000 genomes] |
rs72638312 | 0.80[EUR][1000 genomes] |
rs72638332 | 0.80[EUR][1000 genomes] |
rs73582706 | 1.00[ASN][1000 genomes] |
rs73582713 | 1.00[ASN][1000 genomes] |
rs73582718 | 0.98[ASN][1000 genomes] |
rs73582724 | 1.00[ASN][1000 genomes] |
rs73582755 | 1.00[ASN][1000 genomes] |
rs73582756 | 1.00[ASN][1000 genomes] |
rs73676017 | 0.94[ASN][1000 genomes] |
rs73676077 | 0.84[ASN][1000 genomes] |
rs7388392 | 0.97[ASN][1000 genomes] |
rs7463456 | 0.81[ASN][1000 genomes] |
rs7825552 | 0.95[AFR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs7826013 | 0.97[ASN][1000 genomes] |
rs7828311 | 1.00[ASN][1000 genomes] |
rs7831807 | 0.81[ASN][1000 genomes] |
rs9298228 | 0.84[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs9298229 | 0.95[AFR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs964011 | 0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs967107 | 0.84[ASN][1000 genomes] |
rs974740 | 0.88[ASN][1000 genomes] |
rs974742 | 0.88[ASN][1000 genomes] |
rs986450 | 0.96[EUR][1000 genomes] |
rs9886451 | 0.97[AFR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | esv3353749 | chr8:50530807-51139242 | Enhancers Weak transcription Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 5 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr8:50748400-50752400 | Weak transcription | H9 Cell Line | embryonic stem cell |
2 | chr8:50748600-50754000 | Weak transcription | Liver | Liver |
3 | chr8:50750600-50755200 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |