The 2.0 version of rSNPBase

Variant report

Variant rs72826092
Chromosome Location chr6:12116754-12116755
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:12070800-12120400 Weak transcription Placenta Amnion Placenta Amnion
2 chr6:12071800-12120400 Weak transcription HepG2 liver
3 chr6:12091000-12118800 Weak transcription A549 lung
4 chr6:12091000-12130600 Weak transcription Psoas Muscle Psoas
5 chr6:12095600-12119200 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr6:12103800-12119200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
7 chr6:12103800-12120400 Weak transcription Small Intestine intestine
8 chr6:12106000-12120600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr6:12106000-12120600 Weak transcription Esophagus oesophagus
10 chr6:12106200-12120400 Weak transcription Fetal Kidney kidney
11 chr6:12106800-12120400 Weak transcription Gastric stomach
12 chr6:12107400-12120400 Weak transcription Rectal Smooth Muscle rectum
13 chr6:12107400-12124800 Weak transcription Colon Smooth Muscle Colon
14 chr6:12107600-12120800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr6:12107800-12120600 Weak transcription Brain Angular Gyrus brain
16 chr6:12108000-12117000 Weak transcription Brain Substantia Nigra brain
17 chr6:12108200-12120200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr6:12108400-12116800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr6:12108400-12120400 Weak transcription Colonic Mucosa Colon
20 chr6:12108600-12120200 Weak transcription Stomach Smooth Muscle stomach
21 chr6:12108600-12120400 Weak transcription Skeletal Muscle Female skeletal muscle
22 chr6:12110200-12120400 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr6:12110800-12120400 Weak transcription Hela-S3 cervix
24 chr6:12111200-12116800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr6:12111200-12120400 Weak transcription Duodenum Mucosa Duodenum
26 chr6:12111400-12120400 Weak transcription Fetal Brain Male brain
27 chr6:12112000-12119600 Weak transcription HUES64 Cell Line embryonic stem cell
28 chr6:12112000-12120200 Weak transcription Fetal Muscle Trunk muscle
29 chr6:12112000-12120400 Weak transcription H9 Cell Line embryonic stem cell
30 chr6:12112000-12120400 Weak transcription Fetal Lung lung
31 chr6:12112200-12117000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr6:12112200-12120200 Weak transcription HUES48 Cell Line embryonic stem cell
33 chr6:12112800-12117200 Enhancers Primary B cells from peripheral blood blood
34 chr6:12112800-12119800 Weak transcription iPS-20b Cell Line embryonic stem cell
35 chr6:12113200-12120200 Weak transcription HUES6 Cell Line embryonic stem cell
36 chr6:12113200-12120400 Weak transcription H1 Cell Line embryonic stem cell
37 chr6:12113400-12118600 Weak transcription iPS-18 Cell Line embryonic stem cell
38 chr6:12113400-12120400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr6:12113400-12120400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
40 chr6:12113400-12120600 Weak transcription Placenta Placenta
41 chr6:12113600-12120200 Weak transcription Lung lung
42 chr6:12113600-12120400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
43 chr6:12113600-12120400 Weak transcription Spleen Spleen
44 chr6:12113800-12119200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr6:12113800-12121400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
46 chr6:12114000-12117000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr6:12114000-12120200 Weak transcription HUVEC blood vessel
48 chr6:12114000-12120400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
49 chr6:12114000-12120400 Weak transcription HMEC breast
50 chr6:12114000-12120400 Weak transcription NHEK skin

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Last update: Aug 31, 2015