The 2.0 version of rSNPBase

Variant report

Variant rs6458056
Chromosome Location chr6:12066976-12066977
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:12060000-12067800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr6:12061400-12078600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr6:12061400-12081600 Weak transcription Small Intestine intestine
4 chr6:12061600-12067800 Weak transcription Fetal Brain Male brain
5 chr6:12061600-12069200 Weak transcription Liver Liver
6 chr6:12061600-12069200 Weak transcription Colon Smooth Muscle Colon
7 chr6:12061600-12069200 Weak transcription Fetal Intestine Large intestine
8 chr6:12061600-12069200 Weak transcription Fetal Intestine Small intestine
9 chr6:12061600-12084000 Weak transcription Duodenum Smooth Muscle Duodenum
10 chr6:12061600-12085400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr6:12061600-12105200 Weak transcription Duodenum Mucosa Duodenum
12 chr6:12061600-12109600 Weak transcription HUES6 Cell Line embryonic stem cell
13 chr6:12061800-12071200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr6:12061800-12071400 Weak transcription NH-A brain
15 chr6:12061800-12076800 Weak transcription iPS-18 Cell Line embryonic stem cell
16 chr6:12061800-12076800 Weak transcription iPS-20b Cell Line embryonic stem cell
17 chr6:12061800-12081400 Weak transcription Primary B cells from cord blood blood
18 chr6:12061800-12082000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr6:12061800-12083600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr6:12062000-12069200 Weak transcription A549 lung
21 chr6:12062800-12067000 Enhancers Primary T helper naive cells fromperipheralblood blood
22 chr6:12064000-12067000 Flanking Active TSS GM12878-XiMat blood
23 chr6:12064000-12078400 Weak transcription Ovary ovary
24 chr6:12065000-12071400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
25 chr6:12065200-12095000 Weak transcription NHDF-Ad bronchial
26 chr6:12065800-12067400 Enhancers Breast Myoepithelial Primary Cells Breast
27 chr6:12065800-12081600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
28 chr6:12065800-12081600 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr6:12066000-12068000 Enhancers HUVEC blood vessel
30 chr6:12066000-12070200 Weak transcription Primary T cells from cord blood blood
31 chr6:12066000-12071200 Weak transcription Primary T killer naive cells fromperipheralblood blood
32 chr6:12066200-12067000 Enhancers Osteobl bone
33 chr6:12066200-12081600 Weak transcription Lung lung
34 chr6:12066400-12067000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr6:12066400-12067800 Weak transcription Right Atrium heart
36 chr6:12066400-12070200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr6:12066400-12071000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
38 chr6:12066400-12071200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr6:12066400-12071400 Weak transcription H9 Cell Line embryonic stem cell
40 chr6:12066400-12071400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr6:12066400-12071400 Weak transcription Primary T cells fromperipheralblood blood
42 chr6:12066400-12071400 Weak transcription Primary T killer memory cells from peripheral blood blood
43 chr6:12066400-12071400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr6:12066400-12071400 Weak transcription Esophagus oesophagus
45 chr6:12066400-12073600 Weak transcription Psoas Muscle Psoas
46 chr6:12066400-12075200 Weak transcription Left Ventricle heart
47 chr6:12066400-12076600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr6:12066400-12076800 Weak transcription Aorta Aorta
49 chr6:12066400-12078200 Weak transcription Primary hematopoietic stem cells blood
50 chr6:12066400-12081200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain

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Last update: Aug 31, 2015