The 2.0 version of rSNPBase

Variant report

Variant rs55706944
Chromosome Location chr6:12016743-12016744
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:12013800-12016800 Weak transcription Thymus Thymus
2 chr6:12013800-12017000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr6:12013800-12017000 Weak transcription Primary T cells fromperipheralblood blood
4 chr6:12013800-12017000 Weak transcription Left Ventricle heart
5 chr6:12013800-12017000 Weak transcription Lung lung
6 chr6:12013800-12017000 Weak transcription Right Ventricle heart
7 chr6:12013800-12017000 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr6:12013800-12017000 Weak transcription Spleen Spleen
9 chr6:12013800-12017400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
10 chr6:12013800-12017400 Weak transcription Gastric stomach
11 chr6:12013800-12018200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
12 chr6:12013800-12033600 Weak transcription Psoas Muscle Psoas
13 chr6:12014000-12016800 Weak transcription H9 Cell Line embryonic stem cell
14 chr6:12014000-12016800 Weak transcription Primary neutrophils fromperipheralblood blood
15 chr6:12014000-12017000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr6:12014000-12017000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
17 chr6:12014000-12017000 Weak transcription Primary T killer memory cells from peripheral blood blood
18 chr6:12014000-12017000 Weak transcription Brain Inferior Temporal Lobe brain
19 chr6:12014000-12017000 Weak transcription Placenta Amnion Placenta Amnion
20 chr6:12014000-12017000 Weak transcription Rectal Smooth Muscle rectum
21 chr6:12014000-12017000 Weak transcription Skeletal Muscle Male skeletal muscle
22 chr6:12014000-12017400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
23 chr6:12014000-12017400 Weak transcription Colon Smooth Muscle Colon
24 chr6:12014000-12020400 Weak transcription Brain Hippocampus Middle brain
25 chr6:12014000-12023200 Weak transcription ES-WA7 Cell Line embryonic stem cell
26 chr6:12014000-12023200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
27 chr6:12014000-12031800 Weak transcription Brain Substantia Nigra brain
28 chr6:12014200-12016800 Weak transcription H1 Cell Line embryonic stem cell
29 chr6:12014200-12016800 Weak transcription Primary T killer naive cells fromperipheralblood blood
30 chr6:12014200-12016800 Weak transcription Adipose Nuclei Adipose
31 chr6:12014200-12017000 Weak transcription Colonic Mucosa Colon
32 chr6:12014200-12017000 Weak transcription Fetal Brain Male brain
33 chr6:12014200-12017000 Weak transcription Rectal Mucosa Donor 29 rectum
34 chr6:12014200-12017000 Weak transcription Rectal Mucosa Donor 31 rectum
35 chr6:12014200-12017000 Weak transcription Monocytes-CD14+_RO01746 blood
36 chr6:12014200-12017200 Weak transcription Primary monocytes fromperipheralblood blood
37 chr6:12014400-12016800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr6:12014400-12017000 Weak transcription Cortex derived primary cultured neurospheres brain
39 chr6:12014400-12017000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr6:12014400-12017000 Weak transcription Fetal Kidney kidney
41 chr6:12014400-12017000 Weak transcription Stomach Smooth Muscle stomach
42 chr6:12014400-12017200 Weak transcription Primary T regulatory cells fromperipheralblood blood
43 chr6:12014400-12017400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
44 chr6:12014400-12020200 Weak transcription Primary hematopoietic stem cells blood
45 chr6:12014400-12023200 Weak transcription iPS-15b Cell Line embryonic stem cell
46 chr6:12014400-12024800 Weak transcription Stomach Mucosa stomach
47 chr6:12014400-12030000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
48 chr6:12014600-12016800 Weak transcription Fetal Adrenal Gland Adrenal Gland
49 chr6:12014600-12017000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
50 chr6:12014600-12017000 Weak transcription Ovary ovary

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Last update: Aug 31, 2015